EST details — SGN-C68013
| Search information |
| Request: 68013 | Match: SGN-C68013 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C68013 | Clone name: cLEN-22-J21 |
| ||
| Library Name: cLEN | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: red ripe to over-ripe
Microarray: Alias clone SGN-C183111 is on microarray TOM1: SGN-S1-1-4.2.3.5
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183111 [TUS-41-F5] | Trace: SGN-T195177 | EST: SGN-E393851 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183111 [TUS-41-F5] | Trace: SGN-T195178 | EST: SGN-E393852 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183111 [TUS-41-F5] | Trace: SGN-T195816 | EST: SGN-E394490 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183111 [TUS-41-F5] | Trace: SGN-T195816 | EST: SGN-E398856 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183111 [TUS-41-F5] | Trace: SGN-T200153 | EST: SGN-E398857 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E276973 | Length: 658 bp (1017 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E276973 [] (trimmed)
AGAGACAGAAAATGGAACAACCCAAGAGAAGGGCTCCATTTGTGGATTTGACTCTCTTTATCATCTCCTTCAAACTTCTCTCAGCCCCCAACTTT
TCCAGGAAGTCAATCGAATACTTCTGGGCCTAAATTGTGGAAAGAAACTTGAGTCTATTGCTCTTCCGCAGCCTGTCAAAGCTCTCTCTGCTAAT
CACGACTTTGATCTTCAGGCTTTTAGTTTTTCTGCGGACAAAGAGTCACTTAGAGGACCTCGTGTTGTGAGGGTTGGCCTCATTCAGAATTCTAT
TGCTCTACCCACAACTGAACCTTTCCTAAACCAAAGGGAGGCCATCTTTCAAAAGTTAATTCCCATGATTGATGCTGCAGGCTCTTCAGGAGTCA
ACATTCTATGCTTGCAAGAGGCATGGACGATGCCATTTGCATTTTGTACTCGCGAGAAAAAATGGTGTGAATTTGCTGAAGAGATTGATGGAGAA
TCAACAAAGTTTCTTCAGCAACTTGCACAAAAATATAACATGGTTATCATTAGTCCAATTCTTGAGAGGGATGTGAACCATGGAGAAACCCTGTG
GAACACGGCAGTAATAATTGGAAATCATGGTAACATAATAGGGAAACATCGGAAGAATCATATACCTAGAGTTGGGGACTTCAACGAG
TCCAGGAAGTCAATCGAATACTTCTGGGCCTAAATTGTGGAAAGAAACTTGAGTCTATTGCTCTTCCGCAGCCTGTCAAAGCTCTCTCTGCTAAT
CACGACTTTGATCTTCAGGCTTTTAGTTTTTCTGCGGACAAAGAGTCACTTAGAGGACCTCGTGTTGTGAGGGTTGGCCTCATTCAGAATTCTAT
TGCTCTACCCACAACTGAACCTTTCCTAAACCAAAGGGAGGCCATCTTTCAAAAGTTAATTCCCATGATTGATGCTGCAGGCTCTTCAGGAGTCA
ACATTCTATGCTTGCAAGAGGCATGGACGATGCCATTTGCATTTTGTACTCGCGAGAAAAAATGGTGTGAATTTGCTGAAGAGATTGATGGAGAA
TCAACAAAGTTTCTTCAGCAACTTGCACAAAAATATAACATGGTTATCATTAGTCCAATTCTTGAGAGGGATGTGAACCATGGAGAAACCCTGTG
GAACACGGCAGTAATAATTGGAAATCATGGTAACATAATAGGGAAACATCGGAAGAATCATATACCTAGAGTTGGGGACTTCAACGAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E276973] | SGN-U573816 | Tomato 200607 | Build 2 | 15 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T91669 [Download][View] | Facility Assigned ID: TRRDI59TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.970 | Expected Error Rate: 0.0047 | Quality Trim Threshold: 14.5 |
Working
