EST details — SGN-C67296
| Search information |
| Request: 67296 | Match: SGN-C67296 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C67296 | Clone name: cLEN-18-D10 |
| ||
| Library Name: cLEN | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: red ripe to over-ripe
Microarray: Alias clone SGN-C183023 is on microarray TOM1: SGN-S1-1-4.2.3.8
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183023 [TUS-41-B13] | Trace: SGN-T200141 | EST: SGN-E398842 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E275844 | Length: 610 bp (896 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E275844 [] (trimmed)
GATTCACAGAACAACTACCAAGAGTATTTGAAGCTTAAAACAAGAGTGGAAATGTTACAACAGTCTCAAAGGCATTTGCTAGGTGAGGATTTGGG
ACAATTGGGCACAAAAGACTTGGAACAGCTTGAACGTCAATTGGATTCATCATTGAGGCAAATTAGGTCAACAAAGACACAACACATTCTTGATC
AACTTGCTGAACTTCAACAAAAGGAACAATCTCTTACTGAAATGAACAAATCTTTGAGAATAAAGTTGGAAGAACTTGGTGTTACCTTTCAAACA
TCATGGCATTGTGGTGAGCAAAGTGTACAATATAGACATGAACAGCCTTCTCATCATGAGGGATTTTTTCAACATGTAAATTGCAATAATACATT
GCCTATAAGCACCATCAACACATGATGCTACTGGAGTTGTACCTGGATGGATGCTTTGAATTTGGAGTATATGGAGAGAAAAAATCCTCTTAGTT
ATACAAGTTATTTATTTTTATTAAAAAAATAAGTTAGATGGAGAATTATATATATCATACTTTAAAGAACTTATATTGTTTGAATGTTTTAGCTA
GCAAACACTTTGGATTATATATAATATTGGGATATATTTA
ACAATTGGGCACAAAAGACTTGGAACAGCTTGAACGTCAATTGGATTCATCATTGAGGCAAATTAGGTCAACAAAGACACAACACATTCTTGATC
AACTTGCTGAACTTCAACAAAAGGAACAATCTCTTACTGAAATGAACAAATCTTTGAGAATAAAGTTGGAAGAACTTGGTGTTACCTTTCAAACA
TCATGGCATTGTGGTGAGCAAAGTGTACAATATAGACATGAACAGCCTTCTCATCATGAGGGATTTTTTCAACATGTAAATTGCAATAATACATT
GCCTATAAGCACCATCAACACATGATGCTACTGGAGTTGTACCTGGATGGATGCTTTGAATTTGGAGTATATGGAGAGAAAAAATCCTCTTAGTT
ATACAAGTTATTTATTTTTATTAAAAAAATAAGTTAGATGGAGAATTATATATATCATACTTTAAAGAACTTATATTGTTTGAATGTTTTAGCTA
GCAAACACTTTGGATTATATATAATATTGGGATATATTTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E275844] | SGN-U580017 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T91273 [Download][View] | Facility Assigned ID: TRRCT17TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.928 | Expected Error Rate: 0.0038 | Quality Trim Threshold: 12.5 |
Working
