EST details — SGN-C65656
| Search information |
| Request: 65656 | Match: SGN-C65656 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C65656 | Clone name: cLEN-10-N9 |
| ||
| Library Name: cLEN | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: red ripe to over-ripe
Microarray: Alias clone SGN-C182422 is on microarray TOM1: SGN-S1-1-5.1.8.19
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C182422 [TUS-39-I12] | Trace: SGN-T194883 | EST: SGN-E393557 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E275586 | Length: 577 bp (992 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E275586 [] (trimmed)
CTAGTTTCTCCCTCCCCATTGGAAAAGCTAAGATAGAACGCGAAGGGAAGGATGTGACCATCACTGCCTTCTCAAAGATGGTTGGCTATGCGATC
AAGGCTGCTGAACTTCTTGCCAAGGAAGGAATTAGTGCTGAGGTTATAAATCTGCGCTCGATCCGACCACTTGATAGACCTGCCATTAATGCATC
TGTGAGGAAAACCAACAGACTTGTAACTGTTGAGGAAGGATTTCCACAACATGGTGTTGGCGCTGAAATCTGTGCATCTGTGGTTGAGGAGAGCT
TTGAGTATCTTGATGCACCAGTTGAGAGGATATCAGGTGCTGATGTTCCTATGCCATACGCTGCTAATCTTGAAAGACTGGCTGTTCCACAGGTA
GAGGACATCGTTCGTGCAGTCAAGAGGGTTTGTTACCGATCAAGTAAATAGATCATTTCCAATGGCTGCAGCTGCTTAGGCTTGGTCCAGCGATG
CCTTGATTGTTCCAAAGCATTTAACTTCTATTTGTGGATATCAATTCTTTATCCGCCTATAAGCGTATGCTTTCAGCCATCTTCTGGGAAGTTCA
ATTGACT
AAGGCTGCTGAACTTCTTGCCAAGGAAGGAATTAGTGCTGAGGTTATAAATCTGCGCTCGATCCGACCACTTGATAGACCTGCCATTAATGCATC
TGTGAGGAAAACCAACAGACTTGTAACTGTTGAGGAAGGATTTCCACAACATGGTGTTGGCGCTGAAATCTGTGCATCTGTGGTTGAGGAGAGCT
TTGAGTATCTTGATGCACCAGTTGAGAGGATATCAGGTGCTGATGTTCCTATGCCATACGCTGCTAATCTTGAAAGACTGGCTGTTCCACAGGTA
GAGGACATCGTTCGTGCAGTCAAGAGGGTTTGTTACCGATCAAGTAAATAGATCATTTCCAATGGCTGCAGCTGCTTAGGCTTGGTCCAGCGATG
CCTTGATTGTTCCAAAGCATTTAACTTCTATTTGTGGATATCAATTCTTTATCCGCCTATAAGCGTATGCTTTCAGCCATCTTCTGGGAAGTTCA
ATTGACT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E275586] | SGN-U578825 | Tomato 200607 | Build 2 | 52 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T89458 [Download][View] | Facility Assigned ID: TRRBM77TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.972 | Expected Error Rate: 0.0126 | Quality Trim Threshold: 12.5 |
Working
