Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

EST details — SGN-C65143

Search information 
Request: 65143Match: SGN-C65143
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C65143Clone name: cLEM-8-H15
cartOrder Clone
Library Name: cLEMOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit
Development Stage: immature green fruit

Microarray: Alias clone SGN-C178296 is on microarray TOM1: SGN-S1-1-3.1.4.8
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E271853Length: 521 bp (1017 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E271853 [] (trimmed) GTTTCTTACCTGGTGTTAGATGAAGCAGATCGTGGTGCTGGACATGGGATTTGAACCTCAGATAAGAAAGATTGTGAAAGAGGTGCCTAAGCAGA
GGCAGACATTGATGTATACAGCTACATGGCCAAAGGGGGTTCGTAAGATTGCAGCTGATCTATTGGTTAATTCAGTTCAGGTTAATATTGGTAAT
GTTGACGAGCTTGCTGCAAACAAGTCTATAACACAGCACATTGAAGTCTTGTCTTCGATGTAGAAACAACGGCGACTAGAACAAATTTTGAGATC
CAATGAACCAGGGTCAAAGATCATTATCTTCTGTTCAACAAAGAAAATGTGTGACCAACTATCTCGCAATCTTACTCGCAACTTTGGAGCAGCTG
CAATTCATGGGGATAAATCTCAGGGTGAGAGGGATTATGTATTAAGTCAGTTCCGCACTGGGCAGGTCTCCCGTGCTTGTGGCTACTGATGTTGC
TGCGCGGGGTTTAGACATCAAAGATATCAGGGTGGTGGTGAACTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E271853] SGN-U581126 Tomato 200607 Build 2 57 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T85404 [Download][View] Facility Assigned ID: TGFBE44TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.972 Expected Error Rate: 0.0103 Quality Trim Threshold: 14.5