EST details — SGN-C64593
Search information |
Request: 64593 | Match: SGN-C64593 |
Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
Clone information |
SGN ID: SGN-C64593 | Clone name: cLEM-6-J19 |
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Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C178129 is on microarray TOM1: SGN-S1-1-2.2.4.6
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C178129 [TUS-28-F15] | Trace: SGN-T183484 | EST: SGN-E371124 | Direction: 3' | Facility: INRA |
Clone: SGN-C178129 [TUS-28-F15] | Trace: SGN-T183485 | EST: SGN-E371125 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E270721 | Length: 444 bp (951 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E270721 [] (trimmed)
GCCTCGTGCCGAGAAATTCTAGTAGTTCTACAGATCTTAGAAACCCTAATTATTATATTCTGTAAAGATGGCGACTGAAGAGCCGGTTGTAGCAA
TCGAGCCTGTGAATGAACCGATGGTCGTAGCTGAACCTGCGACGGAAGAAAATCCACCGGCGGAGACTGATGAACCAAAGAAAGAGAAGGAGATC
AAGGCGAAAAAATCATCTGCTCCGAGGAAGAGAAATCCTCCGACTCATCCTTCCTACTTTGAGATGATTAAAGAAGCGATTGTAACATTGAAGGA
TAAAACTGGATCGAGTCAGTATGCGATCACAAAGTTCATTGAAGATAAGCAGAAAAATCTTCCATCAAATTTCAAGAAAATGTTGCTTGCTCAAT
TGAAGAAGCTTGTGGCTTCTGGTAAACTTGTCAAGGTGAAGAGCTCCTACAAGCTTCCAGCTCC
TCGAGCCTGTGAATGAACCGATGGTCGTAGCTGAACCTGCGACGGAAGAAAATCCACCGGCGGAGACTGATGAACCAAAGAAAGAGAAGGAGATC
AAGGCGAAAAAATCATCTGCTCCGAGGAAGAGAAATCCTCCGACTCATCCTTCCTACTTTGAGATGATTAAAGAAGCGATTGTAACATTGAAGGA
TAAAACTGGATCGAGTCAGTATGCGATCACAAAGTTCATTGAAGATAAGCAGAAAAATCTTCCATCAAATTTCAAGAAAATGTTGCTTGCTCAAT
TGAAGAAGCTTGTGGCTTCTGGTAAACTTGTCAAGGTGAAGAGCTCCTACAAGCTTCCAGCTCC
Unigenes |
Current Unigene builds | |||||
[SGN-E270721] | SGN-U578037 | Tomato 200607 | Build 2 | 89 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T84477 [Download][View] | Facility Assigned ID: TGFAW58TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.959 | Expected Error Rate: 0.0093 | Quality Trim Threshold: 14.5 |