EST details — SGN-C64468
| Search information |
| Request: 64468 | Match: SGN-C64468 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C64468 | Clone name: cLEM-6-D6 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C178052 is on microarray TOM1: SGN-S1-1-7.3.4.5
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C178052 [TUS-28-C10] | Trace: SGN-T183406 | EST: SGN-E370216 | Direction: 3' | Facility: INRA |
| Clone: SGN-C178052 [TUS-28-C10] | Trace: SGN-T183407 | EST: SGN-E370217 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E270741 | Length: 569 bp (891 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E270741 [] (trimmed)
GAACAGAATCACATTTTTGACTCAATCGGAAAGTCGGAGCAGAAGACGAGACAACGGAGCAACTACTACCGGAATCCGCCATGAGAACTCTTCAA
GCTTCCACCTACTACAGCGTTGGCTTTGGAATTTCATCTTTTGCTACTCGTCCTAAGCCTTCTTGTACTCATCGCTGCCTCACCGGATCCAAAAT
GGAGCCATGATAGAAATCTGTTGAAATCATGATGAAATTGTAGGAGCAGTATGCTCGCAGGTCAGAAACATATTTCTGCATGGACAAAGGTGTTA
CTTCTGTGGTCATCAAGGGTTTGGCAGAGCACAAGGATACATTGGGTGCTCCACTCTGCCCCTGCAGGCATTATGATGACAAAGCTGCAGAAGCG
CATCAGGGCTTCTGGAATTGTCCGTGTGTACCAATGAGAGAGAGGAAGGAGTGTCACTGCATGCTTTTTCTGACCCCTGATAATGATTTTGCTGG
AGAAGAACAGACGATTACTATGGAGGAGATTAAGGAAACAACAGCCAACATGTGATGCTCGGACATCTTATACATGCTATGAACATTACGTTTT
GCTTCCACCTACTACAGCGTTGGCTTTGGAATTTCATCTTTTGCTACTCGTCCTAAGCCTTCTTGTACTCATCGCTGCCTCACCGGATCCAAAAT
GGAGCCATGATAGAAATCTGTTGAAATCATGATGAAATTGTAGGAGCAGTATGCTCGCAGGTCAGAAACATATTTCTGCATGGACAAAGGTGTTA
CTTCTGTGGTCATCAAGGGTTTGGCAGAGCACAAGGATACATTGGGTGCTCCACTCTGCCCCTGCAGGCATTATGATGACAAAGCTGCAGAAGCG
CATCAGGGCTTCTGGAATTGTCCGTGTGTACCAATGAGAGAGAGGAAGGAGTGTCACTGCATGCTTTTTCTGACCCCTGATAATGATTTTGCTGG
AGAAGAACAGACGATTACTATGGAGGAGATTAAGGAAACAACAGCCAACATGTGATGCTCGGACATCTTATACATGCTATGAACATTACGTTTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E270741] | SGN-U577574 | Tomato 200607 | Build 2 | 39 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T84497 [Download][View] | Facility Assigned ID: TGFAX15TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.983 | Expected Error Rate: 0.0230 | Quality Trim Threshold: 14.5 |
Working
