EST details — SGN-C64325
| Search information |
| Request: 64325 | Match: SGN-C64325 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C64325 | Clone name: cLEM-5-M8 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C177960 is on microarray TOM1: SGN-S1-1-3.3.6.14
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177960 [TUS-27-O14] | Trace: SGN-T182978 | EST: SGN-E370603 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177960 [TUS-27-O14] | Trace: SGN-T182979 | EST: SGN-E370604 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E271246 | Length: 523 bp (885 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E271246 [] (trimmed)
GAATTCATTCATCTTTTTCCTTGTATCTATAAATATATTTTCTGGGGTTGCTCCATTTTTAAGCCACCATTACAGAACCCAAGAAAAAGGGCCCA
AAAATATGAAGCACATAGACAATTTTTTGCTTTAGGTTTATGCCCTCACCCTTGTTTTGCAGGTTGTTGCAGAAAATCCAATATCCCAAGCTAAA
GCGGAATCTGCAATCCTTCAGGACTCAATCGTCAAACAGGTTAATGAAAATGAAAAAGCTGGATGGAGAGCTGCACTAAACCCTCAATTCTCGAA
TTTCACGGTTTCCCAATTTAAGCGCCTTCTTGGAGTTAAGCCCACAAGAAAGGGTGATTTGAAGGGCATCCCTATTTTAACTCATCCAAAACTTT
TGAAGTTACCCCAAGAGTTTGATGCACGAGTGGCTTGGCCTCAGTGTAGCACTATTGGGAGAATTCTTGATCAGGGACATTGTGGTTCTTGTTGG
GCTTTTGGTGCTGCTGAGTCCTTGTCTGATCGTTTCTGTATTCATTAT
AAAATATGAAGCACATAGACAATTTTTTGCTTTAGGTTTATGCCCTCACCCTTGTTTTGCAGGTTGTTGCAGAAAATCCAATATCCCAAGCTAAA
GCGGAATCTGCAATCCTTCAGGACTCAATCGTCAAACAGGTTAATGAAAATGAAAAAGCTGGATGGAGAGCTGCACTAAACCCTCAATTCTCGAA
TTTCACGGTTTCCCAATTTAAGCGCCTTCTTGGAGTTAAGCCCACAAGAAAGGGTGATTTGAAGGGCATCCCTATTTTAACTCATCCAAAACTTT
TGAAGTTACCCCAAGAGTTTGATGCACGAGTGGCTTGGCCTCAGTGTAGCACTATTGGGAGAATTCTTGATCAGGGACATTGTGGTTCTTGTTGG
GCTTTTGGTGCTGCTGAGTCCTTGTCTGATCGTTTCTGTATTCATTAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E271246] | SGN-U567539 | Tomato 200607 | Build 2 | 66 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T85051 [Download][View] | Facility Assigned ID: TGFAR76TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.959 | Expected Error Rate: 0.0142 | Quality Trim Threshold: 14.5 |
Working
