EST details — SGN-C64298

Search information 
Request: 64298Match: SGN-C64298
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C64298Clone name: cLEM-5-L24
cartOrder Clone
Library Name: cLEMOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit
Development Stage: immature green fruit

Microarray: Alias clone SGN-C177943 is on microarray TOM1: SGN-S1-1-4.2.6.18
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C177943 [TUS-27-N21] Trace: SGN-T183188 EST: SGN-E370951 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E271486Length: 518 bp (619 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E271486 [] (trimmed) GTGGCGCTTCCTCATCACCATCTCCAACTACACATTCAACAACAACCACATCAACAACAGCAACAGTCCAAATCTTACAGAGATTTGTACAACAA
TATGGATGGTCAGATAACAAACCCAGTTGTTTATTTCAATGGCTCTAATCTTCCTGAACAGTCTCAACACCCTCCTTATATACCTCCCTTTCAAG
TTGTGGGGTTGGCTCCTGGTACAGCTGATGATGGAGGGTTGGATTTGCAGTGGAATTATGGGTTGGAGCCTAAGAAGAAGAGGCCTAAAGAGCAA
GATTTTATGGAGAATAACAACTCTCAAATATCTTCTGTTGATCTGTTGCAGCGGCGATCGGTGTCCACTGGCTTGGGGTTGTCTTTGGATAATGG
ACGTTTGGCTTCGTCGTGTGACTCAGCGTTTCTAGGGCTTGTGGGTGATGATATTGAGCGAGAATTGCAGAGGCAAGATGCTGAGATTGATAGAT
ACATCAAAGTTCAGGGTGATCGCTTAAGGCAAGCTGTATTGGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E271486] SGN-U568913 Tomato 200607 Build 2 29 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T85291 [Download][View] Facility Assigned ID: TGFAT72TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.970 Expected Error Rate: 0.0045 Quality Trim Threshold: 14.5