EST details — SGN-C64092
| Search information |
| Request: 64092 | Match: SGN-C64092 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C64092 | Clone name: cLEM-5-B24 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C177832 is on microarray TOM1: SGN-S1-1-3.2.6.9
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177832 [TUS-27-J6] | Trace: SGN-T193026 | EST: SGN-E391700 | Direction: 5' | Facility: INRA |
| Clone: SGN-C177832 [TUS-27-J6] | Trace: SGN-T193276 | EST: SGN-E391950 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E271461 | Length: 518 bp (618 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E271461 [] (trimmed)
GGCCATATCATATTCCAAAAACTGGTTAAACAAGTTTACCTAACAGAGGGTTCTCGATGTCACCAGCCATGACCAGCCGGCCGGTGATGCTCTTT
CTTCTCGTTATCACCGTCGCTTCCATAACTTCCGGTGTCCAAGCATCAAGATCCATCGTGTTCTTGCCCCAGCCTTTGTCATCCCTCGATATAAT
CAACACCACTCTGCACCAGGGACAAAATGCACGCTGTTCATTTACGGTAAGCATAAGGACAAGCTGCTCTTCTCCAGCTTACACTAGAGACCAAA
TTAGTTTAGCCTTTGGCGATGCTTATGGAAATCAGGTTTATGCACCGCGGATAGATGACCCGGCAAGCAGGGCTTTTGAGCGGTGTTCGAAGGAT
ACATATACGGTATACGGTCCATGTACGTATCAGATCTGTTATGCGTACCTGTACAGGAGCGGATACGATGGATGGATACCGTATGATGTTACCAT
CTACGGCTACAACTCGAAAGCCGTCACCTTCATCTACAATGTT
CTTCTCGTTATCACCGTCGCTTCCATAACTTCCGGTGTCCAAGCATCAAGATCCATCGTGTTCTTGCCCCAGCCTTTGTCATCCCTCGATATAAT
CAACACCACTCTGCACCAGGGACAAAATGCACGCTGTTCATTTACGGTAAGCATAAGGACAAGCTGCTCTTCTCCAGCTTACACTAGAGACCAAA
TTAGTTTAGCCTTTGGCGATGCTTATGGAAATCAGGTTTATGCACCGCGGATAGATGACCCGGCAAGCAGGGCTTTTGAGCGGTGTTCGAAGGAT
ACATATACGGTATACGGTCCATGTACGTATCAGATCTGTTATGCGTACCTGTACAGGAGCGGATACGATGGATGGATACCGTATGATGTTACCAT
CTACGGCTACAACTCGAAAGCCGTCACCTTCATCTACAATGTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E271461] | SGN-U566615 | Tomato 200607 | Build 2 | 29 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T85266 [Download][View] | Facility Assigned ID: TGFAT12TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.990 | Expected Error Rate: 0.0004 | Quality Trim Threshold: 14.5 |
Working
