EST details — SGN-C62523
| Search information |
| Request: 62523 | Match: SGN-C62523 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C62523 | Clone name: cLEM-21-N23 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C183179 is on microarray TOM1: SGN-S1-1-8.1.3.6
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183179 [TUS-41-I1] | Trace: SGN-T191704 | EST: SGN-E390378 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E272761 | Length: 639 bp (932 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E272761 [] (trimmed)
TTATAGATAGACAGAAGAGTAAGAGGGAGAGTTTTGAAAGAGAGAAAAAATGGCTTCTTTGTCAATGGGAAGTTGGGTATGTTCAGGAATAGGAA
ACCACAGACCATCCGCTTCGCTTTCTCTACGTACTGGTTCTTCAACAACGACTACTTCTGTTTCTTTGAAAATGGCTGCTAATGCCTCTACTCAT
TCTGGGTTGCTTCACTGCTCTTTTCTTCCTTCCTCTGCACTCTCTACATTATCTTCTTCAACATCCTTTTCTGGTTCATCATTTGGCATTGGCTT
CAATTCCAACATTGGAGTGAGCACCACTAAAAGGCGTGGCCTGGTGGTGCAGGCAAAGAAGTATGCTCTTTGTCAGACTAAGAGGAATAGGTCGA
GGAAGTCGTTGGCTCGAACACATGGTTTTCGCAAGCGTATGAGCACCACCAGTGGCAGAGCAACTATCCAGCGAAGACGTGCAAAAGGCCGATGG
GATCTCTGCCCAAAGTCTTCACCTAGAACTGGAAAACGAGCTTAATGTTTATTGTTTTCTTGCAACTGATTTTTGTTGGTAATATGTTAACTATC
TTTTTCAGAATTTTGGGCTGCTGTAATTNTCATCTGTTTTATTTAAAGAACTAATTTACTAGTTTCCAT
ACCACAGACCATCCGCTTCGCTTTCTCTACGTACTGGTTCTTCAACAACGACTACTTCTGTTTCTTTGAAAATGGCTGCTAATGCCTCTACTCAT
TCTGGGTTGCTTCACTGCTCTTTTCTTCCTTCCTCTGCACTCTCTACATTATCTTCTTCAACATCCTTTTCTGGTTCATCATTTGGCATTGGCTT
CAATTCCAACATTGGAGTGAGCACCACTAAAAGGCGTGGCCTGGTGGTGCAGGCAAAGAAGTATGCTCTTTGTCAGACTAAGAGGAATAGGTCGA
GGAAGTCGTTGGCTCGAACACATGGTTTTCGCAAGCGTATGAGCACCACCAGTGGCAGAGCAACTATCCAGCGAAGACGTGCAAAAGGCCGATGG
GATCTCTGCCCAAAGTCTTCACCTAGAACTGGAAAACGAGCTTAATGTTTATTGTTTTCTTGCAACTGATTTTTGTTGGTAATATGTTAACTATC
TTTTTCAGAATTTTGGGCTGCTGTAATTNTCATCTGTTTTATTTAAAGAACTAATTTACTAGTTTCCAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E272761] | SGN-U564858 | Tomato 200607 | Build 2 | 31 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T86759 [Download][View] | Facility Assigned ID: TGFDE84THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.981 | Expected Error Rate: 0.0042 | Quality Trim Threshold: 12.5 |
Working
