EST details — SGN-C62405
| Search information |
| Request: 62405 | Match: SGN-C62405 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C62405 | Clone name: cLEM-21-H6 |
| ||
| Library Name: cLEM | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit
Development Stage: immature green fruit
Microarray: Alias clone SGN-C181487 is on microarray TOM1: SGN-S1-1-4.2.12.5
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C181487 [TUS-37-B13] | Trace: SGN-T194036 | EST: SGN-E392710 | Direction: 5' | Facility: INRA |
| Clone: SGN-C181487 [TUS-37-B13] | Trace: SGN-T199289 | EST: SGN-E397963 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E272782 | Length: 619 bp (1005 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E272782 [] (trimmed)
CGAGGGATGAGTTGTTGTGGGCCAGCATTGTGGTTATACCAAAGCCACCGACAAAGAAGATTATTTGGAGTATGTAATTAACAAGGCAAATTCAT
TTGGAGGTATTGGTTGGGCTATTACTGAGTTCAGTTGGGATGTTAAATTTGCTGGTCTACAAATTATTGCTTCTAAGATACTGCAGGAGAAAAAA
TACAACAAACACATTCACATACAAGAACAATATCGTTCAAAAGCCGAACACTACATATGTTCATGTCTCAACAAAAACAACGGTACTACCAACGT
CAATCGTACCCCAGGCGGACTACTATACGTCCGTCAATGGAACAACATGCAATACGTATCGAACGCCGCCTTCCTCCTCACATTCTACTCGGATT
TCCTTAGAAAAATCGACAAAAAAATCGTGTGTCATGGAGGAATAGTTGATCATGAAGAACTATTCAGTTTTGCTAAATCTCAAGTGGATTACATA
TTGGGCTCAAACCCAAAAAACATGAGTTATCTAGTGGGTTTTGGGCCAAATTATCCAAAAAGAGTACACCATAGAGGGGCCTCAATTGTGTCTTA
TAGAGAGAATAAAGGCTTTATTGGATGTACTCAAGGGTATGATTATTGG
TTGGAGGTATTGGTTGGGCTATTACTGAGTTCAGTTGGGATGTTAAATTTGCTGGTCTACAAATTATTGCTTCTAAGATACTGCAGGAGAAAAAA
TACAACAAACACATTCACATACAAGAACAATATCGTTCAAAAGCCGAACACTACATATGTTCATGTCTCAACAAAAACAACGGTACTACCAACGT
CAATCGTACCCCAGGCGGACTACTATACGTCCGTCAATGGAACAACATGCAATACGTATCGAACGCCGCCTTCCTCCTCACATTCTACTCGGATT
TCCTTAGAAAAATCGACAAAAAAATCGTGTGTCATGGAGGAATAGTTGATCATGAAGAACTATTCAGTTTTGCTAAATCTCAAGTGGATTACATA
TTGGGCTCAAACCCAAAAAACATGAGTTATCTAGTGGGTTTTGGGCCAAATTATCCAAAAAGAGTACACCATAGAGGGGCCTCAATTGTGTCTTA
TAGAGAGAATAAAGGCTTTATTGGATGTACTCAAGGGTATGATTATTGG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E272782] | SGN-U578042 | Tomato 200607 | Build 2 | 16 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T86780 [Download][View] | Facility Assigned ID: TGFDF39TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.968 | Expected Error Rate: 0.0077 | Quality Trim Threshold: 14.5 |
Working
