EST details — SGN-E550418
| Search information |
| Request: 550418 | Match: SGN-E550418 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C169243 | Clone name: TUS-5-D9 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C18586 [cLED-23-P18] | Trace: SGN-T54610 | EST: SGN-E239645 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C169243 [TUS-5-D9] | Trace: SGN-T351043 | EST: SGN-E550168 | Direction: 5' | Facility: Avesthagen |
| Sequence |
| Sequence Id: SGN-E550418 | Length: 714 bp (762 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E550418 [] (trimmed)
TTGGAATTTTCTGTATATCATTTCTTCGAATACATGTATATATACAGCTATGTGGGAATCAAAAGAACATTCTATTCCTAACTGACTATACAGGT
GTCCTACTGCTATTTGCTATTCAATAACAAACTTTATTCTCTAAAACAATCTAACTGAAAATATTTCTAGATCATCAATATGTACACAAACTAGA
TATTTCATCAATTTGGGCCCGTATACAATTTGATTTTCCAGGCCCAATTTGAGGAATATTTTTAGGTCCACTCCAAAGAAGAGGAGGCCCAATCT
GAGGCCACTCTAAAGAAGAGGAGGCCCAATCTGAGCCCCAATCTGAGGAAGCCCAAATGTTTTCTTCTTTGCTTGTTTGTCCACATTTCCTTTGC
TGTATTTCTCCTTGAAGGAGCTGAAGAAGAAGATGGAGCTGAAATCTCAACAACTATTATGAAAAAAGCTATATAAGCTAGCAAACTTACATAAA
AGATACCACAATACCAATTGTCAATTGAATAGACATTTTAATCGGTGCTTTGAGATAATAAACTACAATTCTTCACTAATTCGGTAACCTTCAAA
CCTTTCAGGTTAATTTCTCTATCTCTTTGAAATGAAATTTTGCCGCAAGCATCACCCAATGACAGCTAGGTGTATATAGTTCATGTAGAATAAAC
AAGCTGCTTGTAAATTTAAAACATCACACGGTGTGTCAGTGACGGATCT
GTCCTACTGCTATTTGCTATTCAATAACAAACTTTATTCTCTAAAACAATCTAACTGAAAATATTTCTAGATCATCAATATGTACACAAACTAGA
TATTTCATCAATTTGGGCCCGTATACAATTTGATTTTCCAGGCCCAATTTGAGGAATATTTTTAGGTCCACTCCAAAGAAGAGGAGGCCCAATCT
GAGGCCACTCTAAAGAAGAGGAGGCCCAATCTGAGCCCCAATCTGAGGAAGCCCAAATGTTTTCTTCTTTGCTTGTTTGTCCACATTTCCTTTGC
TGTATTTCTCCTTGAAGGAGCTGAAGAAGAAGATGGAGCTGAAATCTCAACAACTATTATGAAAAAAGCTATATAAGCTAGCAAACTTACATAAA
AGATACCACAATACCAATTGTCAATTGAATAGACATTTTAATCGGTGCTTTGAGATAATAAACTACAATTCTTCACTAATTCGGTAACCTTCAAA
CCTTTCAGGTTAATTTCTCTATCTCTTTGAAATGAAATTTTGCCGCAAGCATCACCCAATGACAGCTAGGTGTATATAGTTCATGTAGAATAAAC
AAGCTGCTTGTAAATTTAAAACATCACACGGTGTGTCAGTGACGGATCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E550418] | SGN-U573174 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T351293 [Download][View] | Facility Assigned ID: AGT-258_D09_TUS05#1-D9.Td_064 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.959 | Expected Error Rate: 0.0049 | Quality Trim Threshold: 20.5 |
Working
