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EST details — SGN-E550393

Search information 
Request: 550393Match: SGN-E550393
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C169534Clone name: TUS-5-P12
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C21117 [cLED-31-L14] Trace: SGN-T56765 EST: SGN-E242846 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E550393Length: 489 bp (784 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E550393 [] (trimmed) TGGTAGTTATTTGTCTTTCATTTCGTTCAGTACAGTTTCTGTACTATAATCTTACAATTTTTTACTAGATGAGCAACAATGGAAGGAAAAAACAT
GAGAATGTGTTTGTTAAATGAAAAGGAAATATTGACTTTATATTGTCCATGTTGGGATAACTATATGTTCTTCTAGTAAGGCAGTGGATGAAGAA
CTTGATCAGTTTGTTGGAAACAATAGTCTGCTGCTTCTGGAGGTATAAGCTGCAAGTCATTATTAGAATATGCATTTTGCTGGCTCGAGTTCTGG
GAATGGTGAAACTCGTGGTTCTCGGGTGTGAATGGAGAAACTTGCATTAAGGATGAGGGTAAGGATGATGTTGAAGCATCGGATAATTGTGTTCT
GAGAGACATTGCTTCAGCTGAAGCTTCGTTTAACTCGGATTGTAAGTGAAATATGTGTTTCTGGAGGGCAGAAATAATGCCTACACTGCCATAAA
CTGGATCTCTGCTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E550393] SGN-U583964 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T351268 [Download][View] Facility Assigned ID: AGT-276_H12_TUS5#3-H12.Td_102
Submitter: Koni Sequencing Facility: Avesthagen
Funding Organization: Italian Ministry of Agriculture and Forestry (MiPAF)
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.949 Expected Error Rate: 0.0045 Quality Trim Threshold: 14.5