EST details — SGN-E549815
| Search information |
| Request: 549815 | Match: SGN-E549815 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C169725 | Clone name: TUS-6-H11 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C26156 [cLEF-37-O13] | Trace: SGN-T59845 | EST: SGN-E244255 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E549815 | Length: 718 bp (787 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E549815 [] (trimmed)
GGAAGGGAAGGCAGAGATTGTGCCCGGTGTCCTCTTCATTGACGAAGTACATATGCTTGACATTGAGTGTTTCTCTTTCCTAAACCGAGCTCTGG
AGAATGACATGGCACCTATATTGGTTGTTGCTACAAATAGAGGCATTACTACAATCCGGGGAACAAACTACAGATCCCCACACGGGATTCCAATT
GACTTTCTTGATCGCCTGCTCATCATCTCTACACAACCTTACAAAGAGGAAGAAATTCGCAAAATCCTGGACATCAGATGCCAAGAGGAGGATGT
AGAAATGTCTGAGGATGCAAAAGTTTTATTGACCAAGATCGGGGTTAATACTTCTTTGAGATACGCCATCCATCTTATCACTTCTGCAGCATTGG
CCTGCCAAAAGCGCAAAGGGAAGGCTGTTGAAGTGGAAGATATTACTCGAGTCTATAATCTGTTTTATGATGTGAAGAGATCCACACAGTACTTG
ATGGAGTATCAGAGCCAGTATATGTTTAACGAAGTGCCAGCCGGAGAGGCCGAAGAAGATGAAACTGCTGCAATGGTGTCCTANAACCTTCTCGA
CATGGGATTCAGGAGATTGCAACTTAGCTTTGGCCAAGTATTTAGTTACCTGGTTCTTGTTTGATGATTTCTTCTCTTTCATTTATGTTTTCTGA
CCTTTGTGTTACTTGAATATAGTTCCCCTCCCCGGTTTCTTTTTTCTCGTTTA
AGAATGACATGGCACCTATATTGGTTGTTGCTACAAATAGAGGCATTACTACAATCCGGGGAACAAACTACAGATCCCCACACGGGATTCCAATT
GACTTTCTTGATCGCCTGCTCATCATCTCTACACAACCTTACAAAGAGGAAGAAATTCGCAAAATCCTGGACATCAGATGCCAAGAGGAGGATGT
AGAAATGTCTGAGGATGCAAAAGTTTTATTGACCAAGATCGGGGTTAATACTTCTTTGAGATACGCCATCCATCTTATCACTTCTGCAGCATTGG
CCTGCCAAAAGCGCAAAGGGAAGGCTGTTGAAGTGGAAGATATTACTCGAGTCTATAATCTGTTTTATGATGTGAAGAGATCCACACAGTACTTG
ATGGAGTATCAGAGCCAGTATATGTTTAACGAAGTGCCAGCCGGAGAGGCCGAAGAAGATGAAACTGCTGCAATGGTGTCCTANAACCTTCTCGA
CATGGGATTCAGGAGATTGCAACTTAGCTTTGGCCAAGTATTTAGTTACCTGGTTCTTGTTTGATGATTTCTTCTCTTTCATTTATGTTTTCTGA
CCTTTGTGTTACTTGAATATAGTTCCCCTCCCCGGTTTCTTTTTTCTCGTTTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E549815] | SGN-U567663 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T350690 [Download][View] | Facility Assigned ID: AGT-286_H11_TUS6#1-H11.T3_089 |
| Submitter: Koni | Sequencing Facility: Avesthagen |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.981 | Expected Error Rate: 0.0085 | Quality Trim Threshold: 14.5 |
Working
