EST details — SGN-E549565
| Search information |
| Request: 549565 | Match: SGN-E549565 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C194733 | Clone name: TUS-71-J11 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C104939 [cLPP-16-I4] | Trace: SGN-T176367 | EST: SGN-E363985 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C194733 [TUS-71-J11] | Trace: SGN-T348491 | EST: SGN-E547616 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E549565 | Length: 762 bp (871 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E549565 [] (trimmed)
TTTATTTTTTTAATAATAATAAATTAAGAGTTAAAAAAGATGGTTCTAGATGGTTGGGATGATGTTATGGCTGGACCCCGTCCTACTAATAGTAG
ATTTCTAAAGGGCCTATCTGTCAACACTTCTGGTGGAGAAGGAGGAGAAGGAGCAAGTAAGAGTTACCAAAGGTCTTTATCTATGCCGGGCTCGG
GCTCAAGTTTATCGAGCCCAAGGACACCGGGAAGCCCGGGGACCCCAAACACTTACTCGCCAACGGCGCGTAAAGATAATGTGTGGAGGAGCGTG
TTCAATCCAGGGAGCAACAGTGCAACCAAGAGAATTGGTGCTGAAGTCTTTGACAAACCTTCTCACCCCAATGCACCCACTGTTTATGATTGGCT
CTACAGTGGGGATACCCGATCCAAGCATCAGTGAAATGAAAGGCTAAAAGATTTTGGATCGTGACAGAGCGATATCTGAATAATGTTATATGTAA
ATAAAGTATTTTTCTTTTAATGTATGAGTTGCTATGCTACAGAAACATGGAGATTAATTAGTGGATGTTAATCCTATGTTTTCATTATGTATTAA
TTAACTAGTACTAATATATGTGTAATTAGGTTTGATGAAAGCTAACTTGAGTATATTCAGTGGCTTTCTAGCTACTGCTACTACTATTATATAAA
TTAGTAGTGGATTAGTAGTACCATAATAATTTTAAAAATACTATAATGTTGTTTTGTTATGTATTTTGAAATATAATAATAANTAAGTTTGGATG
TG
ATTTCTAAAGGGCCTATCTGTCAACACTTCTGGTGGAGAAGGAGGAGAAGGAGCAAGTAAGAGTTACCAAAGGTCTTTATCTATGCCGGGCTCGG
GCTCAAGTTTATCGAGCCCAAGGACACCGGGAAGCCCGGGGACCCCAAACACTTACTCGCCAACGGCGCGTAAAGATAATGTGTGGAGGAGCGTG
TTCAATCCAGGGAGCAACAGTGCAACCAAGAGAATTGGTGCTGAAGTCTTTGACAAACCTTCTCACCCCAATGCACCCACTGTTTATGATTGGCT
CTACAGTGGGGATACCCGATCCAAGCATCAGTGAAATGAAAGGCTAAAAGATTTTGGATCGTGACAGAGCGATATCTGAATAATGTTATATGTAA
ATAAAGTATTTTTCTTTTAATGTATGAGTTGCTATGCTACAGAAACATGGAGATTAATTAGTGGATGTTAATCCTATGTTTTCATTATGTATTAA
TTAACTAGTACTAATATATGTGTAATTAGGTTTGATGAAAGCTAACTTGAGTATATTCAGTGGCTTTCTAGCTACTGCTACTACTATTATATAAA
TTAGTAGTGGATTAGTAGTACCATAATAATTTTAAAAATACTATAATGTTGTTTTGTTATGTATTTTGAAATATAATAATAANTAAGTTTGGATG
TG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E549565] | SGN-U585574 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T350440 [Download][View] | Facility Assigned ID: TUS71J11_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.962 | Expected Error Rate: 0.0049 | Quality Trim Threshold: 14.5 |
Working
