EST details — SGN-E549428
| Search information |
| Request: 549428 | Match: SGN-E549428 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C194249 | Clone name: TUS-70-F7 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C106050 [cLPP-1-K23] | Trace: SGN-T174593 | EST: SGN-E362532 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C194249 [TUS-70-F7] | Trace: SGN-T347660 | EST: SGN-E546785 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E549428 | Length: 706 bp (888 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E549428 [] (trimmed)
AAACAAAAACAAACATACGTTTTATGTATAATTAAAAAAAATGATGATCATACATCAAATCAATCAATCAAACTTACAATAAGAATATCAAACAT
CGAGATTTTTTTTATTCAAAATCGTTATTTTATTTTTTATTTTTTGTAATTATTAATTTTAAGAAGCTGCGGCGGCCGCGGCGGGAGCGGGAGCA
TTAGCAGGAGCATCAGCACCAGCTGAACAAATAGCTGGAGTTTGTTTTCCCTTAAAAGTTGGCTTAATATTTTCACAACTTGATTTTGCTGGTCC
TTCTTTACCACTATATGAAATGTCAACATCTCCAACTTCAACACCTTCACATGGTGAGCCTTTGCTACAAGTTAGTGAGACTGCATTATGAGTTC
TTGATGTACCTTTTATGTTTTGGATAGACACCTTGCTAATCTTCACTTGTGAAGGCAAGTCTTTGTTGCATTTTCCACTTGGGCAATAAACTTGA
TCAATGACAATAGGGTTGCTAACATTTTGCACAATGATATCTTCAAAATGTATATCAGATACAACACCAGGATGTGAAGCAGGCCATGTCTTGAT
CCTAACACCATTATCAGTGCTAACTAAAGTGCAATTTTTAACAAAAACACCAACAACTGGCTTTTCACCAGGATTTCCACCAAGGGAACCAACAC
TAATACCATGACCAGGTCCACAAGTGACTTTAGTGATGTAA
CGAGATTTTTTTTATTCAAAATCGTTATTTTATTTTTTATTTTTTGTAATTATTAATTTTAAGAAGCTGCGGCGGCCGCGGCGGGAGCGGGAGCA
TTAGCAGGAGCATCAGCACCAGCTGAACAAATAGCTGGAGTTTGTTTTCCCTTAAAAGTTGGCTTAATATTTTCACAACTTGATTTTGCTGGTCC
TTCTTTACCACTATATGAAATGTCAACATCTCCAACTTCAACACCTTCACATGGTGAGCCTTTGCTACAAGTTAGTGAGACTGCATTATGAGTTC
TTGATGTACCTTTTATGTTTTGGATAGACACCTTGCTAATCTTCACTTGTGAAGGCAAGTCTTTGTTGCATTTTCCACTTGGGCAATAAACTTGA
TCAATGACAATAGGGTTGCTAACATTTTGCACAATGATATCTTCAAAATGTATATCAGATACAACACCAGGATGTGAAGCAGGCCATGTCTTGAT
CCTAACACCATTATCAGTGCTAACTAAAGTGCAATTTTTAACAAAAACACCAACAACTGGCTTTTCACCAGGATTTCCACCAAGGGAACCAACAC
TAATACCATGACCAGGTCCACAAGTGACTTTAGTGATGTAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E549428] | SGN-U574366 | Tomato 200607 | Build 2 | 34 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T350303 [Download][View] | Facility Assigned ID: TUS70F07_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.964 | Expected Error Rate: 0.0072 | Quality Trim Threshold: 14.5 |
Working
