EST details — SGN-E548920
| Search information |
| Request: 548920 | Match: SGN-E548920 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C192449 | Clone name: TUS-65-K7 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C92732 [cLEX-12-F7] | Trace: SGN-T117315 | EST: SGN-E304450 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C192449 [TUS-65-K7] | Trace: SGN-T344568 | EST: SGN-E543693 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E548920 | Length: 841 bp (900 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E548920 [] (trimmed)
AACGACAAATTTGCTTAGAGTAACACAGCTAAATTGTTGTAGTTTCAAACCTCAAAAGTAGACTAACAAAAACAAATACAAATTGAGCTTAGCAG
ATCCAAATAGTAAAGTATGGCAGCAGCTTTACATGAAAAAACACTCAGGTCTTCATTAGTGTCACAGCATCTTGAATGCCGAATCCTACAAAAGA
ATTAGTAACAACAATATACGACACCAAGCTCAACACGATGCATTTTACATTGTACCTTTCCCCTTTTGCTTCTTCGTGTGAGAGCATAATCCAAG
ACTACTGAAGAGGGATTAGAAGAGAGATTTGTACTACTCTCACCTGACAATGTTTAGCTTCTCTAACCTGACATCATGACATTATCGATCGACTG
GAGTGCTTGATTGGCATAAAAGCGAACATCGACATCAGGGTCTTCGGCTAGCTCTACTAAACTGGGCCGAATGGTTTTCTCCACCACCGAGTTGT
CAACAATAGGTACAAGGGATTGCAACACCTTTGCCACATTAAATTTAATGTTGGGCACTCTATCCTTTGTAGCAGTAACAACCACAGGTAGCAAC
TTAGAACAAGTTATCTCAGAGCCCATTACTGGTGCAAGCAATGAAATTGATCTAAGAATAGTCATTCGATACAAATAATGTGGACTGGTAGTCAT
ATCCAAGACCTGAGGAATTATATGCTGCATTGCCCACTCTGGACCAAATTCTTCTGCAAGACGCTTCAAGTTATTAGCAGCAGCATCTCTAATTG
AATAAACCTTGTCCTGTAACCATTGCATGCAAAGAGCACCCAGCTTATCATCAAAAAATCCTATGCCCCATTGACTTGCCA
ATCCAAATAGTAAAGTATGGCAGCAGCTTTACATGAAAAAACACTCAGGTCTTCATTAGTGTCACAGCATCTTGAATGCCGAATCCTACAAAAGA
ATTAGTAACAACAATATACGACACCAAGCTCAACACGATGCATTTTACATTGTACCTTTCCCCTTTTGCTTCTTCGTGTGAGAGCATAATCCAAG
ACTACTGAAGAGGGATTAGAAGAGAGATTTGTACTACTCTCACCTGACAATGTTTAGCTTCTCTAACCTGACATCATGACATTATCGATCGACTG
GAGTGCTTGATTGGCATAAAAGCGAACATCGACATCAGGGTCTTCGGCTAGCTCTACTAAACTGGGCCGAATGGTTTTCTCCACCACCGAGTTGT
CAACAATAGGTACAAGGGATTGCAACACCTTTGCCACATTAAATTTAATGTTGGGCACTCTATCCTTTGTAGCAGTAACAACCACAGGTAGCAAC
TTAGAACAAGTTATCTCAGAGCCCATTACTGGTGCAAGCAATGAAATTGATCTAAGAATAGTCATTCGATACAAATAATGTGGACTGGTAGTCAT
ATCCAAGACCTGAGGAATTATATGCTGCATTGCCCACTCTGGACCAAATTCTTCTGCAAGACGCTTCAAGTTATTAGCAGCAGCATCTCTAATTG
AATAAACCTTGTCCTGTAACCATTGCATGCAAAGAGCACCCAGCTTATCATCAAAAAATCCTATGCCCCATTGACTTGCCA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E548920] | SGN-U569038 | Tomato 200607 | Build 2 | 99 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T349795 [Download][View] | Facility Assigned ID: TUS65K07_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.974 | Expected Error Rate: 0.0009 | Quality Trim Threshold: 20.5 |
Working
