EST details — SGN-E548669
| Search information |
| Request: 548669 | Match: SGN-E548669 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C191564 | Clone name: TUS-63-F10 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C89107 [cLEW-11-L21] | Trace: SGN-T112975 | EST: SGN-E300135 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C191564 [TUS-63-F10] | Trace: SGN-T343044 | EST: SGN-E542169 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E548669 | Length: 845 bp (899 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E548669 [] (trimmed)
AGGAAGCAACAATAACATAATCCATAATCTTCCATAAATTTACAAATGCATGTTTCAAACTTATATACGCATCTGCTAGGTGGTATTCAAGAACA
AGTAGAGAGTTGCCTCTCAAAACAATGAAAAGTATGTCTAGTTGTTGAGAGGCCCAGATACCGATGGCTAGAGGACCAATTATTCTAGTTTCTTG
ATGTCATGCAATATTTGGGAGAATTACACTTGTCCATTTCCAGATAGAAAGGTAGTCTTTTCTATCGGCCAAGGAGCCCCCGCCATCACTGCCTC
TATCTCTTCAATCTTCCGCGGACATTTGCTCATGTTAATGCATCCAATGGAAGTAACACACTGTTGATCTCAACACGATTGAAAAACTCTGAAAC
TGCTGGACTCTTCAAGGCAGGAAGTAGCAAGGCATCAATGAAGTAACAACCAGGCTCCACAGTGATCACCATTCCCTTTAAGAGCTTTCTGCTCG
TACGTAGAGAGCTCAATCCAGGTTCTTTTGGTCTTTTAGCTCCCTTCAAGTAACCCCCAGGATCATGAGTATCAATTCCAAGAAGGTGCCCCAAT
CCATGAGGCATGAAAACAGCACCAAGTCGCTCGGCCATCATTTTATCAACATCCCCAACAAGTAGGTTCCCTTTCTTCAGTGATTCCAAAATGAC
CCTTTCAGCTAATTTATGCATATCGACCCAGCTCACTCCAGGCTTCATGGCAGAAATGACAGCATCATGAGCATCAAGAACAGCAGTATATAAAA
GTGACTGGTCACGAGTAAATTTCCCATTTACTGGAAAGGACAAGTTATGTCGGACCCATAAAAGTGTACTCAGCTCCCATATCTA
AGTAGAGAGTTGCCTCTCAAAACAATGAAAAGTATGTCTAGTTGTTGAGAGGCCCAGATACCGATGGCTAGAGGACCAATTATTCTAGTTTCTTG
ATGTCATGCAATATTTGGGAGAATTACACTTGTCCATTTCCAGATAGAAAGGTAGTCTTTTCTATCGGCCAAGGAGCCCCCGCCATCACTGCCTC
TATCTCTTCAATCTTCCGCGGACATTTGCTCATGTTAATGCATCCAATGGAAGTAACACACTGTTGATCTCAACACGATTGAAAAACTCTGAAAC
TGCTGGACTCTTCAAGGCAGGAAGTAGCAAGGCATCAATGAAGTAACAACCAGGCTCCACAGTGATCACCATTCCCTTTAAGAGCTTTCTGCTCG
TACGTAGAGAGCTCAATCCAGGTTCTTTTGGTCTTTTAGCTCCCTTCAAGTAACCCCCAGGATCATGAGTATCAATTCCAAGAAGGTGCCCCAAT
CCATGAGGCATGAAAACAGCACCAAGTCGCTCGGCCATCATTTTATCAACATCCCCAACAAGTAGGTTCCCTTTCTTCAGTGATTCCAAAATGAC
CCTTTCAGCTAATTTATGCATATCGACCCAGCTCACTCCAGGCTTCATGGCAGAAATGACAGCATCATGAGCATCAAGAACAGCAGTATATAAAA
GTGACTGGTCACGAGTAAATTTCCCATTTACTGGAAAGGACAAGTTATGTCGGACCCATAAAAGTGTACTCAGCTCCCATATCTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E548669] | SGN-U567502 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T349544 [Download][View] | Facility Assigned ID: TUS63F10_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.975 | Expected Error Rate: 0.0014 | Quality Trim Threshold: 14.5 |
Working
