EST details — SGN-E548662
| Search information |
| Request: 548662 | Match: SGN-E548662 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C191538 | Clone name: TUS-63-E8 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
See unigene SGN-U575339 for alternative clones/ESTs which are mapped
| Additional sequencing |
| Clone: SGN-C89032 [cLEW-11-G3] | Trace: SGN-T112775 | EST: SGN-E299935 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C191538 [TUS-63-E8] | Trace: SGN-T342997 | EST: SGN-E542122 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E548662 | Length: 616 bp (868 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E548662 [] (trimmed)
GCACATTTTATCCCATATATATATGAATGAACCTTGTTTCCCAGAAGAAAATTCTTCAATTTCTTGTATCATGAATCATCTACCCAATAAACGCC
GTAGAAGGAGGAAAGAAATCGTACAACAAACCCCAACTAATAGTAGCGCAGGTGGTGGTGGTAATGATGAATTTGGGTCGGAAAATCAAGGGGCT
GTCAAAACGAAGGAGTTGAAACAGATATTAACCTCTTTGTTGTTACTTGAAGAGCAAGAAAAATCGGAATTTGCAAAGGAAGAGGAAGAGGATAA
ACACTTACTCGAAGCCAATCATAAGAAAACAACGAAAGTGATGTGGGATTATTATTCCAATGTTCAACAGCATCATTCTGATTTAGAACAGTTAG
ATGGTGTTCGAAAGAGGAAAGGGAGAGGGAATTCTGCTGCTCTTACTGCTACTGCTTGTGCCCTTGCTTCTGCAGCTGCAGAGGAAGAAGGGGTT
TCCAGTAATAAATCTACCGATAAAGGTGCGCCTCATAGGCGATTGTGGGTGAAGAATAGGTCAAAAGCTTGGTGGGATCAAATGGTAACAGTCCT
GATTTCCCTGAAGAGGAGTTTAAGAAAGCGTTTCGGATGGGGAAAG
GTAGAAGGAGGAAAGAAATCGTACAACAAACCCCAACTAATAGTAGCGCAGGTGGTGGTGGTAATGATGAATTTGGGTCGGAAAATCAAGGGGCT
GTCAAAACGAAGGAGTTGAAACAGATATTAACCTCTTTGTTGTTACTTGAAGAGCAAGAAAAATCGGAATTTGCAAAGGAAGAGGAAGAGGATAA
ACACTTACTCGAAGCCAATCATAAGAAAACAACGAAAGTGATGTGGGATTATTATTCCAATGTTCAACAGCATCATTCTGATTTAGAACAGTTAG
ATGGTGTTCGAAAGAGGAAAGGGAGAGGGAATTCTGCTGCTCTTACTGCTACTGCTTGTGCCCTTGCTTCTGCAGCTGCAGAGGAAGAAGGGGTT
TCCAGTAATAAATCTACCGATAAAGGTGCGCCTCATAGGCGATTGTGGGTGAAGAATAGGTCAAAAGCTTGGTGGGATCAAATGGTAACAGTCCT
GATTTCCCTGAAGAGGAGTTTAAGAAAGCGTTTCGGATGGGGAAAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E548662] | SGN-U575339 | Tomato 200607 | Build 2 | 29 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T349537 [Download][View] | Facility Assigned ID: TUS63E08_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.955 | Expected Error Rate: 0.0051 | Quality Trim Threshold: 14.5 |
Working
