EST details — SGN-E548620
| Search information |
| Request: 548620 | Match: SGN-E548620 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C191389 | Clone name: TUS-62-O3 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C91635 [cLEW-7-N3] | Trace: SGN-T112275 | EST: SGN-E297048 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C191389 [TUS-62-O3] | Trace: SGN-T342741 | EST: SGN-E541866 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E548620 | Length: 750 bp (858 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E548620 [] (trimmed)
GGTGAACTTACATTAAGCATTATTTCATCATGGGATGGGCAAAATATGCCAGAGGAAAGCTATCTTTGCCTGTAATAACAGGAATTTTCTGTGCA
CTAACATTCATTGTTTTATTGTACACTGAAAGGATCACTACTTCTTCTTCTGGTTTCCATTTTGGGATCAAAACTTGTCCGAGACGAAATGCTGC
AAAGTTAAAAAAACATCATACAGGTGTTATTAGAGAGTTGAAGAGCAGTCCACTAGACAATCCAACAGATGATAGGTTCGTGTTTGATCCCGAGG
AATGCAGCCTCAATAACGGGAAATGGGTGTTTAATACTACGATTAAGCCACTATACACAGATAGAACTTGTCCATATATTGACAGACAATATTCT
TGTACTAAGAATGGACGAGACGATTCAGATTATCTTCACTGGGAATGGCGGCCTGATGACTGCATCTTGCCAAGGTTTGATCCGACGATTGCCCT
TAGAAAACTCCAAGGGAAGAGGATAATGTTTGTAGGAGACTCAATACAGAGAAATATGTGGGAATCTTTTGTGTGTTTGGTTCAATCTGTGATTC
CAGAAGGCGAAAAGTCTATGAAACTAGGACAGGTTTATTCAGTCTTTAAAGCTAAGGAATACAATGCCAGCATTGAATTCTACTGGGCACCATTC
TTGGTTGAGTCAACACAGATATTCATATAAAAGCCGATTCAAAACAGAGAATCATCAAAGTGGATTCTATCACCGAGCGTGCCAA
CTAACATTCATTGTTTTATTGTACACTGAAAGGATCACTACTTCTTCTTCTGGTTTCCATTTTGGGATCAAAACTTGTCCGAGACGAAATGCTGC
AAAGTTAAAAAAACATCATACAGGTGTTATTAGAGAGTTGAAGAGCAGTCCACTAGACAATCCAACAGATGATAGGTTCGTGTTTGATCCCGAGG
AATGCAGCCTCAATAACGGGAAATGGGTGTTTAATACTACGATTAAGCCACTATACACAGATAGAACTTGTCCATATATTGACAGACAATATTCT
TGTACTAAGAATGGACGAGACGATTCAGATTATCTTCACTGGGAATGGCGGCCTGATGACTGCATCTTGCCAAGGTTTGATCCGACGATTGCCCT
TAGAAAACTCCAAGGGAAGAGGATAATGTTTGTAGGAGACTCAATACAGAGAAATATGTGGGAATCTTTTGTGTGTTTGGTTCAATCTGTGATTC
CAGAAGGCGAAAAGTCTATGAAACTAGGACAGGTTTATTCAGTCTTTAAAGCTAAGGAATACAATGCCAGCATTGAATTCTACTGGGCACCATTC
TTGGTTGAGTCAACACAGATATTCATATAAAAGCCGATTCAAAACAGAGAATCATCAAAGTGGATTCTATCACCGAGCGTGCCAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E548620] | SGN-U566241 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T349495 [Download][View] | Facility Assigned ID: TUS62O03_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.969 | Expected Error Rate: 0.0018 | Quality Trim Threshold: 14.5 |
Working
