EST details — SGN-E547562
| Search information |
| Request: 547562 | Match: SGN-E547562 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C194701 | Clone name: TUS-71-I3 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C104709 [cLPP-15-H13] | Trace: SGN-T176232 | EST: SGN-E361256 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C194701 [TUS-71-I3] | Trace: SGN-T348436 | EST: SGN-E547561 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E547562 | Length: 806 bp (890 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E547562 [] (trimmed)
GGGAACACACCGACCCTTTCTTACCTGTCTGTCAGTTTTTTACTATTCCTAACATGCTTTCTTCTCTTCTTCTTCTATTCTTCCAATCTGCAACT
TTTTTTTCTCTCTCCTTTTCTCACTGTTAACTCCGGACAGATCTGCTCTACCGCCGGTCTAATTTTCCGGCAGTGTTACTTCCTCTACAGGAAGG
AAGCTTTGCATTACACCTCCAGACCTGTAATGCTTCCATATTTAGTAGTGATAAAAGAGAAGAGAAAATGAATCGGAGCTTCAGAGATTCTTTGA
TCACCGGGAAGAATTTCCCTATCTCTTCGCAGCATCGGCGAGGACTTAGTCTTAATGGAGCTTCTAGGGAGCCCGACGATCATTTGGATCTCTTC
TCCAAAAGTCGCCGGAGTGTTTCTGTTGCCTCCTCCGACGAGACTGATGTTACGGTTAAGCTGGGAAGGCTTTCAATTGGATCAGTAAAACAATT
AAAGAGTGGATTAGAGGATCCGTTGGCATCTACGGAAGGAGAGAAACATGATTATGATTGGCTCCTCACTCCTCCAGGAACACCTCTTGTTCCTA
CATCAGATGGAAGTGAATCAAAACCAGCTTCAGTGGGTCCAAGGGGCAGCTCATTGGGAAGATCTTCTTCCACTACTAANGCTTCAAGGCTTTCA
GTGTCTCATTCAGAGAGCAACACTCCTGCAAGACCAACTCGGAGTAATTCAGTAACTCGACCCTTCATTTCTAGCTCTCAGTATAGTACTTACTC
AAATAAATCAGGCTCTATTCTAAACACAAGCTCTGCATCGGTCTCC
TTTTTTTCTCTCTCCTTTTCTCACTGTTAACTCCGGACAGATCTGCTCTACCGCCGGTCTAATTTTCCGGCAGTGTTACTTCCTCTACAGGAAGG
AAGCTTTGCATTACACCTCCAGACCTGTAATGCTTCCATATTTAGTAGTGATAAAAGAGAAGAGAAAATGAATCGGAGCTTCAGAGATTCTTTGA
TCACCGGGAAGAATTTCCCTATCTCTTCGCAGCATCGGCGAGGACTTAGTCTTAATGGAGCTTCTAGGGAGCCCGACGATCATTTGGATCTCTTC
TCCAAAAGTCGCCGGAGTGTTTCTGTTGCCTCCTCCGACGAGACTGATGTTACGGTTAAGCTGGGAAGGCTTTCAATTGGATCAGTAAAACAATT
AAAGAGTGGATTAGAGGATCCGTTGGCATCTACGGAAGGAGAGAAACATGATTATGATTGGCTCCTCACTCCTCCAGGAACACCTCTTGTTCCTA
CATCAGATGGAAGTGAATCAAAACCAGCTTCAGTGGGTCCAAGGGGCAGCTCATTGGGAAGATCTTCTTCCACTACTAANGCTTCAAGGCTTTCA
GTGTCTCATTCAGAGAGCAACACTCCTGCAAGACCAACTCGGAGTAATTCAGTAACTCGACCCTTCATTTCTAGCTCTCAGTATAGTACTTACTC
AAATAAATCAGGCTCTATTCTAAACACAAGCTCTGCATCGGTCTCC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E547562] | SGN-U565810 | Tomato 200607 | Build 2 | 17 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T348437 [Download][View] | Facility Assigned ID: TUS71I03_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.971 | Expected Error Rate: 0.0104 | Quality Trim Threshold: 14.5 |
Working
