EST details — SGN-E547241
| Search information |
| Request: 547241 | Match: SGN-E547241 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C194515 | Clone name: TUS-71-A9 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C108592 [cLPP-9-I3] | Trace: SGN-T172613 | EST: SGN-E359950 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C194515 [TUS-71-A9] | Trace: SGN-T348117 | EST: SGN-E547242 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E547241 | Length: 760 bp (896 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E547241 [] (trimmed)
GATCGTCAATGTTTCTCATATCATTTTATTGACTGATAAATCGATACCAATGGATATTGTTGATTAAAGTAACTAGTAAATTACAACACCATAGT
ACATCAAAAGAAAAATGAGAAAAAGAAATGGAAATATTTTCTCCAATGCATAAAATGGCATATGAAGACAACCCGAATTTTCACTAGGTGGAAAC
AATTATCTAGTGACCGGTTGGCTATATGAATCATCATTTCTTTTTCTTCGAATCTTTTGGATTCTCTCACATCTATCTACTATTAATTAAAAAAA
AAAAAGCAAACCGTTTTTCTTCTTTTTTTTTTAATTACAGAAAATAAGAGAAATTAAACCTAAAAGTCAATGATAGGTTCACCAATTGTGAGATT
TCTCTCCAATGACCATGGTAAATTGAAGAGTTTAGCAGTGATGAACTTGAATATCTTGTTCACATTAATGTTGTATGTTGCACTTGAGAAAAATA
ATGGTGCATTTAGTGCCTTTGCATATGCTCTTGCCTGACTTGCAATTGTCCATTGAAGATCCAATGGCAATTTCACAAAATCATCAAACTTTGTC
CCTATCATTACAGGAGTTGCTGTCTGATTCCATTGACGTGCTTGTTGATGCCAGCTAAGGACACTACTGAGTGTACATCTACTTGTGAGATCAAA
CATGAAAAACATTGCTACAGAATCCTTACAAGCCATTGGGATTTGAGTTGGGCCAGAAACATCACCTTTAACTTCCCACATGCTATATGAGATTC
ACATCAAAAGAAAAATGAGAAAAAGAAATGGAAATATTTTCTCCAATGCATAAAATGGCATATGAAGACAACCCGAATTTTCACTAGGTGGAAAC
AATTATCTAGTGACCGGTTGGCTATATGAATCATCATTTCTTTTTCTTCGAATCTTTTGGATTCTCTCACATCTATCTACTATTAATTAAAAAAA
AAAAAGCAAACCGTTTTTCTTCTTTTTTTTTTAATTACAGAAAATAAGAGAAATTAAACCTAAAAGTCAATGATAGGTTCACCAATTGTGAGATT
TCTCTCCAATGACCATGGTAAATTGAAGAGTTTAGCAGTGATGAACTTGAATATCTTGTTCACATTAATGTTGTATGTTGCACTTGAGAAAAATA
ATGGTGCATTTAGTGCCTTTGCATATGCTCTTGCCTGACTTGCAATTGTCCATTGAAGATCCAATGGCAATTTCACAAAATCATCAAACTTTGTC
CCTATCATTACAGGAGTTGCTGTCTGATTCCATTGACGTGCTTGTTGATGCCAGCTAAGGACACTACTGAGTGTACATCTACTTGTGAGATCAAA
CATGAAAAACATTGCTACAGAATCCTTACAAGCCATTGGGATTTGAGTTGGGCCAGAAACATCACCTTTAACTTCCCACATGCTATATGAGATTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E547241] | SGN-U564362 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T348116 [Download][View] | Facility Assigned ID: TUS71A09_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.942 | Expected Error Rate: 0.0032 | Quality Trim Threshold: 12.5 |
Working
