EST details — SGN-E546489
| Search information |
| Request: 546489 | Match: SGN-E546489 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C194077 | Clone name: TUS-69-O3 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C102552 [cLHT-28-L10] | Trace: SGN-T171629 | EST: SGN-E358371 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E546489 | Length: 749 bp (900 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E546489 [] (trimmed)
AAAAAGTTGCATAGATATTATATAGCTCATAAGTCCTTAACTAATAACAGTGAACTACATCCTTCAGATGTCAAAGCAAGACACATACAAGAGAA
TCTATGATAAAAAACTAAAGAACTCAAAAGGAACCATGATCCACCTATGGGAAAAGATTTGATCACAACGAGTCACATCACAACTCCCAAGGGAT
GGGGGTTGAGCTTCATCCTCGATTTTGAAGCTTTGCATCTTTTGCTCATCATGAAGGACAGGAACAACAAAATCAGACTAGTCTTTTTTCCCTCC
TTTATTGGAACCAGAAGCACGTGGTTTCTGCTTCCCTGATTTTCTTCTGGAACTGACCAGGTTTGGCTGGGTAGAATGAGCAGGCATGTGATGCC
CAGGAACCAAAGCAGGGAACCCAACAGCAGGGATTCCAAAAAGAGCACGGCAGACTCCTGCTTGGTCATAGAAACACCATTAGCACTGCTATTAT
GCAAAGAAAAGCGTAAAGCTTGATTTTCAGCAAGACAGCACTGGAGAACAAACCCCAGCCTTTTGCATTCTGATTCAAAGTATCTACTCTTCAAC
TCTAGATCCCTAACGTACAACTTCTTCCTCTCTCGTGACCTCACAGGCTGCATCTCTGTTCCTCAATTGCCTCTTGCGCTTCTTATCGACGGGGT
CATGGTTGTTTAGTTCGTCGTCCCCGTCAGAAGGCGACTGGGAAACCTTGTGTTTGTCCTGATCGGCACTAGAAACCTTGGGAT
TCTATGATAAAAAACTAAAGAACTCAAAAGGAACCATGATCCACCTATGGGAAAAGATTTGATCACAACGAGTCACATCACAACTCCCAAGGGAT
GGGGGTTGAGCTTCATCCTCGATTTTGAAGCTTTGCATCTTTTGCTCATCATGAAGGACAGGAACAACAAAATCAGACTAGTCTTTTTTCCCTCC
TTTATTGGAACCAGAAGCACGTGGTTTCTGCTTCCCTGATTTTCTTCTGGAACTGACCAGGTTTGGCTGGGTAGAATGAGCAGGCATGTGATGCC
CAGGAACCAAAGCAGGGAACCCAACAGCAGGGATTCCAAAAAGAGCACGGCAGACTCCTGCTTGGTCATAGAAACACCATTAGCACTGCTATTAT
GCAAAGAAAAGCGTAAAGCTTGATTTTCAGCAAGACAGCACTGGAGAACAAACCCCAGCCTTTTGCATTCTGATTCAAAGTATCTACTCTTCAAC
TCTAGATCCCTAACGTACAACTTCTTCCTCTCTCGTGACCTCACAGGCTGCATCTCTGTTCCTCAATTGCCTCTTGCGCTTCTTATCGACGGGGT
CATGGTTGTTTAGTTCGTCGTCCCCGTCAGAAGGCGACTGGGAAACCTTGTGTTTGTCCTGATCGGCACTAGAAACCTTGGGAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E546489] | SGN-U580933 | Tomato 200607 | Build 2 | 34 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T347364 [Download][View] | Facility Assigned ID: TUS69O03_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.976 | Expected Error Rate: 0.0074 | Quality Trim Threshold: 14.5 |
Working
