EST details — SGN-E546470
| Search information |
| Request: 546470 | Match: SGN-E546470 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C194066 | Clone name: TUS-69-N16 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C102496 [cLHT-28-D5] | Trace: SGN-T171603 | EST: SGN-E358345 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C194066 [TUS-69-N16] | Trace: SGN-T347346 | EST: SGN-E546471 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E546470 | Length: 737 bp (935 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E546470 [] (trimmed)
AGAAATTGCAACTTTTATATCAATATAATAAAAGCACTTGGTAAAATACTGAATAATTTATATCATTAACTCTAGAAAAAATTGTGACAACTTAA
AAAAAAAGTACTTGCTTTAGAAGACATTGGGCTCCAGCAGCAGTTAAGCCCAATAGATTACACTGACACATTAACTTTCCTAAAATGTTAAATTT
ACAAAGAAAAGTAATAATAGTTATTATTATTTCAAACCTTTTTTGGTAAAGAAAAAGTTCATTTGTGGAATCGCAGATTTCACTTGGTGACAGTA
TTTTACGGATAATCGAAGTAAAATACATGCTGAGATATCTGACAAAATTGGTGATTATAGTATGTGAAATAACTACTGCTTTGTTCTATTATTCA
GTTAACATTTTCTTTTATTTGATAAGATAAAAATCAATTAATTAATCATAATTATATTTGCAAATTACTCAATTTTATTTTAAAATAAAAAAATT
ACTTTGAAAATATCTCAATTTTATCACTGCAATATAATATTTCTAAACTAATAACCGCAGGTAAATATATTTTACTGCCTCAATCATTAATGGTG
GGCAAATCTAAGAGTCAACTTTGCCGAAATTGAGAAATCACTTTCACCATGAATTCTTGTCGACATGAACCCGTGTGCTAAAATTACACAGCGGT
CACAGTTTTTATAATCTTCAAATAATACTTCCTTTAGTTCACATTAATTAAATTTGTTAAATTATCACTTTT
AAAAAAAGTACTTGCTTTAGAAGACATTGGGCTCCAGCAGCAGTTAAGCCCAATAGATTACACTGACACATTAACTTTCCTAAAATGTTAAATTT
ACAAAGAAAAGTAATAATAGTTATTATTATTTCAAACCTTTTTTGGTAAAGAAAAAGTTCATTTGTGGAATCGCAGATTTCACTTGGTGACAGTA
TTTTACGGATAATCGAAGTAAAATACATGCTGAGATATCTGACAAAATTGGTGATTATAGTATGTGAAATAACTACTGCTTTGTTCTATTATTCA
GTTAACATTTTCTTTTATTTGATAAGATAAAAATCAATTAATTAATCATAATTATATTTGCAAATTACTCAATTTTATTTTAAAATAAAAAAATT
ACTTTGAAAATATCTCAATTTTATCACTGCAATATAATATTTCTAAACTAATAACCGCAGGTAAATATATTTTACTGCCTCAATCATTAATGGTG
GGCAAATCTAAGAGTCAACTTTGCCGAAATTGAGAAATCACTTTCACCATGAATTCTTGTCGACATGAACCCGTGTGCTAAAATTACACAGCGGT
CACAGTTTTTATAATCTTCAAATAATACTTCCTTTAGTTCACATTAATTAAATTTGTTAAATTATCACTTTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E546470] | SGN-U572143 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T347345 [Download][View] | Facility Assigned ID: TUS69N16_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.903 | Expected Error Rate: 0.0081 | Quality Trim Threshold: 14.5 |
Working
