EST details — SGN-E546225
| Search information |
| Request: 546225 | Match: SGN-E546225 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C193923 | Clone name: TUS-69-H17 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C101854 [cLHT-22-E9] | Trace: SGN-T171003 | EST: SGN-E358518 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C193923 [TUS-69-H17] | Trace: SGN-T350211 | EST: SGN-E549336 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E546225 | Length: 817 bp (893 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E546225 [] (trimmed)
GCAGCAATTTGCTGTCTTTATGATGTCACAAGTTGACCTAGCAAGAGAAGCTGCCCATCTAAGTCGTTTTATTTATAATTTTCGAAGATGGAAAA
ATGTCTCTTTCCCTAAGCCTGTTTATCCATTAGTACATCCTGCCGTGCTGGTGGAAACTTTTGAGGAAGGAGAAAGTGTCGCCCACTATGTTGAT
GAACTTCAGGGTCATGAGCGACTTAAGAGTGCTCTTGCTCATATTGGAACTCATGCCCTTCTCAAGATGCTTCTGGTTGACAATTTCATGCATGC
AGACATGCATCCAGGAAATATTCTTGTCCGTGTACAACAGCACAAGTCCTCTCAGAAACAGATATTCAAGTCAAAGCCACATGTGATTTTCCTTG
ATGTAGGCATGACTGCTGAACTTTCTCAGAATGATAAGTTGAATTTGCTTGAATTTTTTAAGGCTGTTGCTCGTCGAGATGGTTCCACTGCAGCG
CAGTGCACTTTAAATTTATCAAAAAAGCAGAATTGCCCTAATCCAGACGCCTTCATTAAGGAAGTGAAAGAGTCTTTTGATTTTTGGGGGACTCC
GGAAGGAGATTTAGTCCATCCTGGGGACTGCATGACACAACTACTTGAACAAGTTAGGCGTCACAGAGTGAACATTGATGGCAATGTGTGCACTG
CAATGGTTACAACTTTAGTCCTGGAGGGCTGGCAACGGAAACTTGATCCAGAATACAATATAATGCACACACTACAGACGTTGCTTCTCAAAGCC
GACTGGGCAAAGGATCTTTCCTACACAATCGAACAGGTCATGGCTCCATGAAACTTC
ATGTCTCTTTCCCTAAGCCTGTTTATCCATTAGTACATCCTGCCGTGCTGGTGGAAACTTTTGAGGAAGGAGAAAGTGTCGCCCACTATGTTGAT
GAACTTCAGGGTCATGAGCGACTTAAGAGTGCTCTTGCTCATATTGGAACTCATGCCCTTCTCAAGATGCTTCTGGTTGACAATTTCATGCATGC
AGACATGCATCCAGGAAATATTCTTGTCCGTGTACAACAGCACAAGTCCTCTCAGAAACAGATATTCAAGTCAAAGCCACATGTGATTTTCCTTG
ATGTAGGCATGACTGCTGAACTTTCTCAGAATGATAAGTTGAATTTGCTTGAATTTTTTAAGGCTGTTGCTCGTCGAGATGGTTCCACTGCAGCG
CAGTGCACTTTAAATTTATCAAAAAAGCAGAATTGCCCTAATCCAGACGCCTTCATTAAGGAAGTGAAAGAGTCTTTTGATTTTTGGGGGACTCC
GGAAGGAGATTTAGTCCATCCTGGGGACTGCATGACACAACTACTTGAACAAGTTAGGCGTCACAGAGTGAACATTGATGGCAATGTGTGCACTG
CAATGGTTACAACTTTAGTCCTGGAGGGCTGGCAACGGAAACTTGATCCAGAATACAATATAATGCACACACTACAGACGTTGCTTCTCAAAGCC
GACTGGGCAAAGGATCTTTCCTACACAATCGAACAGGTCATGGCTCCATGAAACTTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E546225] | SGN-U566686 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T347100 [Download][View] | Facility Assigned ID: TUS69H17_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.982 | Expected Error Rate: 0.0030 | Quality Trim Threshold: 14.5 |
Working
