EST details — SGN-E544809
| Search information |
| Request: 544809 | Match: SGN-E544809 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C193099 | Clone name: TUS-67-F9 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C97308 [cLEY-20-N2] | Trace: SGN-T120672 | EST: SGN-E307862 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C193099 [TUS-67-F9] | Trace: SGN-T345685 | EST: SGN-E544810 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E544809 | Length: 607 bp (913 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E544809 [] (trimmed)
ACACAAAACAAACACACTTTTATAAATAGACGCAACAGGAACAGAAACCAACAACATGACACAATTCAAAGTGCAGAAACATAAAAGGCTTCTGG
TGGAACACCAAAAGGCAAGACTAGTTGAGAAATTGCACACAGACGTTGCAAATCCCAACAGACACAAGTTTGGACGTATAAGTCCATTATTCTGA
GAAAACAACAGACACTGAAATAAAAACAACAATACGACCCTCAAGACAACACTACTCCTTTCCTTCTTTCTCTTCCTCCTTCCAGCAGCCCTTCA
GAACGGACTTGGGAGATTCACAGTAAGGAGTTCTAGTGAACTTCTGGTAGACAATGGAACCGCCTTTGCCAAACTCTTCTGGACTCCACTCAGCA
AGAGAGTAGCCCTTAACATCAACAGAGCAAACATGCTCCAGTAACTTGGTAGCAACATCAGCATGCAGAGCAATAGAGAACTCAGCTGGCTCAAA
ACATGCAAGCACCCTCTCAACCAGGGGACCCAACTCATTGGTTTTAGGATCATATCCAACAGATTCAAAGCTGGCATAGCTAAAGCCGTCCTCCC
GGGTAATGTGAATGGTTGAAACAGCAGCTCCTTCAAT
TGGAACACCAAAAGGCAAGACTAGTTGAGAAATTGCACACAGACGTTGCAAATCCCAACAGACACAAGTTTGGACGTATAAGTCCATTATTCTGA
GAAAACAACAGACACTGAAATAAAAACAACAATACGACCCTCAAGACAACACTACTCCTTTCCTTCTTTCTCTTCCTCCTTCCAGCAGCCCTTCA
GAACGGACTTGGGAGATTCACAGTAAGGAGTTCTAGTGAACTTCTGGTAGACAATGGAACCGCCTTTGCCAAACTCTTCTGGACTCCACTCAGCA
AGAGAGTAGCCCTTAACATCAACAGAGCAAACATGCTCCAGTAACTTGGTAGCAACATCAGCATGCAGAGCAATAGAGAACTCAGCTGGCTCAAA
ACATGCAAGCACCCTCTCAACCAGGGGACCCAACTCATTGGTTTTAGGATCATATCCAACAGATTCAAAGCTGGCATAGCTAAAGCCGTCCTCCC
GGGTAATGTGAATGGTTGAAACAGCAGCTCCTTCAAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E544809] | SGN-U580064 | Tomato 200607 | Build 2 | 541 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T345684 [Download][View] | Facility Assigned ID: TUS67F09_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.954 | Expected Error Rate: 0.0073 | Quality Trim Threshold: 14.5 |
Working
