EST details — SGN-E544781
| Search information |
| Request: 544781 | Match: SGN-E544781 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C193082 | Clone name: TUS-67-E16 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C97125 [cLEY-19-P11] | Trace: SGN-T120502 | EST: SGN-E306655 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C193082 [TUS-67-E16] | Trace: SGN-T345655 | EST: SGN-E544780 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E544781 | Length: 746 bp (906 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E544781 [] (trimmed)
GCAAGTATGAATGATTACTTACCCGTTACCCCCTCCTTGATTATTTAAACGAGCAACTTGATCTGCAGATTCTACACTGAATTCTGCTAAATACC
AGCTTCCTCTCAATCCCCGCGTTAATAATTGAACGCTCACATTCTCTCCCGGCTTCTTCTCTCTTTCACACATTTACACAAGTACTGGTAATACC
TTTCAATAGAGAGGGAGAAGGAGATAACAGAGGAATCAAGATCCAAAAAAATGGGGTCTCTTCCACCACCATATCGGGAATTCTTTAATAACTCC
TCCTCAAAGCAAGATTCAATTGACCCAGATCAGCTTCTTAAGCTCTTCAAAGCCCAGCAGAATTATCTCAATCATTTCTTTCAAAATCTTGATCT
TTCTCAAACTCTTAATTTTACCCAAACTCTACTTAATGCCAAAGGTTCCATTTACTTTACTGGTGTGGGGAAATCTGGGTTTGTTTCCCAGAAAA
TATCACAGACCCTTGTTTCTCTCGGTATTAAATCTGGGTTTTTATCCCCTGTTGATGCCCTTCATGGAGACATTGGCATTTTGGATCCGCAAGAT
GTTTTGGTTATGTTTAGCAAGAGTGGGAATACGGAAGAATTGTTAAAGCTTGTGCCTTGTGCAAAGGCGAAACGGGTCTTTTTGATTTCGGTTAC
TTCGGTAAAGCCTAATTCTTTGATGGGTGTGTGTGATCTGAATGTGCATTTGCCTTTAGAGAGAGATTGTGCCCTTTTGAT
AGCTTCCTCTCAATCCCCGCGTTAATAATTGAACGCTCACATTCTCTCCCGGCTTCTTCTCTCTTTCACACATTTACACAAGTACTGGTAATACC
TTTCAATAGAGAGGGAGAAGGAGATAACAGAGGAATCAAGATCCAAAAAAATGGGGTCTCTTCCACCACCATATCGGGAATTCTTTAATAACTCC
TCCTCAAAGCAAGATTCAATTGACCCAGATCAGCTTCTTAAGCTCTTCAAAGCCCAGCAGAATTATCTCAATCATTTCTTTCAAAATCTTGATCT
TTCTCAAACTCTTAATTTTACCCAAACTCTACTTAATGCCAAAGGTTCCATTTACTTTACTGGTGTGGGGAAATCTGGGTTTGTTTCCCAGAAAA
TATCACAGACCCTTGTTTCTCTCGGTATTAAATCTGGGTTTTTATCCCCTGTTGATGCCCTTCATGGAGACATTGGCATTTTGGATCCGCAAGAT
GTTTTGGTTATGTTTAGCAAGAGTGGGAATACGGAAGAATTGTTAAAGCTTGTGCCTTGTGCAAAGGCGAAACGGGTCTTTTTGATTTCGGTTAC
TTCGGTAAAGCCTAATTCTTTGATGGGTGTGTGTGATCTGAATGTGCATTTGCCTTTAGAGAGAGATTGTGCCCTTTTGAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E544781] | SGN-U570038 | Tomato 200607 | Build 2 | 18 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T345656 [Download][View] | Facility Assigned ID: TUS67E16_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.968 | Expected Error Rate: 0.0055 | Quality Trim Threshold: 14.5 |
Working
