EST details — SGN-E544778
| Search information |
| Request: 544778 | Match: SGN-E544778 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C193081 | Clone name: TUS-67-E15 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C97127 [cLEY-19-P7] | Trace: SGN-T120608 | EST: SGN-E306761 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C193081 [TUS-67-E15] | Trace: SGN-T345654 | EST: SGN-E544779 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E544778 | Length: 814 bp (892 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E544778 [] (trimmed)
CTCACAACATTATTTCTTTCTTTTACTTCATGCCAAAGCAATTGATCCTTCAAAATTGCAGGATCAATTGCGTTTATCCCATAACAATTTACATC
AAATCTCTCTAGAGATGTTTATTTTAACATGTAAGAGACCCGAAAATAGAATACAAGAATCCTTGACCAGATCATTTTGCCGAGATACTTCTGTC
GTCAGCCCGTACGAATAATATGATATCTGAACTCAATGAGAGAACAACAATAGCACCTGTTTGAAGTTCAGATTGATCTTTCTCTTGACTGGACA
CTTTTGTTCTACCTCAACAATTCATCCATAGTACATCATCAAATTCACCCCTCAACTTATCTCCTACTATAACGTTCCGTTCTATGTCCAAAGCA
GTCATAGGCGTACCTGATGGGTGCCATGCCGGAGTTCCATTCTCATATGCATTACATGTCAGTCGTCTCAACCCACTCCCATCCAACTTCACCAA
ATATAAGTCACCGTAGGGTTGATATTGATTTGGCAGTGACACTGGTTCTGCTGTTACTCCACCCAAGTTGCCCGTGAACAGAAGCCATTCACAGT
CCTTACTAAAGCATACGTGGTTTAGCCTCTCTTTATCTACTTCATCAGATCCCTCTGGCCCTGCCACGTGGATCCTACGAAGACCTGTGCCGTTT
GGATGAATCACATAAATGCTGAAGCAAGTGACATTATCCGGATTGTGCCTGTTGGAAGAAATGCAATCAGCTTTCCATCAGGTGGACAGCTTGGC
ATTGTATCAATCCATGGCCCCTCTGTTAGCTGACGAATCCTCCACCCTCAGCTC
AAATCTCTCTAGAGATGTTTATTTTAACATGTAAGAGACCCGAAAATAGAATACAAGAATCCTTGACCAGATCATTTTGCCGAGATACTTCTGTC
GTCAGCCCGTACGAATAATATGATATCTGAACTCAATGAGAGAACAACAATAGCACCTGTTTGAAGTTCAGATTGATCTTTCTCTTGACTGGACA
CTTTTGTTCTACCTCAACAATTCATCCATAGTACATCATCAAATTCACCCCTCAACTTATCTCCTACTATAACGTTCCGTTCTATGTCCAAAGCA
GTCATAGGCGTACCTGATGGGTGCCATGCCGGAGTTCCATTCTCATATGCATTACATGTCAGTCGTCTCAACCCACTCCCATCCAACTTCACCAA
ATATAAGTCACCGTAGGGTTGATATTGATTTGGCAGTGACACTGGTTCTGCTGTTACTCCACCCAAGTTGCCCGTGAACAGAAGCCATTCACAGT
CCTTACTAAAGCATACGTGGTTTAGCCTCTCTTTATCTACTTCATCAGATCCCTCTGGCCCTGCCACGTGGATCCTACGAAGACCTGTGCCGTTT
GGATGAATCACATAAATGCTGAAGCAAGTGACATTATCCGGATTGTGCCTGTTGGAAGAAATGCAATCAGCTTTCCATCAGGTGGACAGCTTGGC
ATTGTATCAATCCATGGCCCCTCTGTTAGCTGACGAATCCTCCACCCTCAGCTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E544778] | SGN-U584581 | Tomato 200607 | Build 2 | 31 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T345653 [Download][View] | Facility Assigned ID: TUS67E15_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.970 | Expected Error Rate: 0.0077 | Quality Trim Threshold: 14.5 |
Working
