EST details — SGN-E544193
| Search information |
| Request: 544193 | Match: SGN-E544193 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C192740 | Clone name: TUS-66-G10 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C95373 [cLEY-11-K13] | Trace: SGN-T118832 | EST: SGN-E306908 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C192740 [TUS-66-G10] | Trace: SGN-T349877 | EST: SGN-E549002 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E544193 | Length: 798 bp (907 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E544193 [] (trimmed)
GGAAGGGGCAAATATTCCAGAAACTGCTAGAAATATCTGGTGGTCTCTTCGCCATTTCTCTATTATCTTCATCTCTCTGTAAAAACTCCAATCAA
ATACTAACCCTTGAGTAGAACAAGAGTAAGAAATAGGAAACTCCGGCGACGAAAGTAACAGATCGCAACTGTAACGGAAATGCCATGGACGATGT
AGATGCTGACATGATGGAGGCGGAGTCCACGGTGTCAGTGGAGCCACCGGTACCGCCACTGCCACCGTCACCGTCACCGTCACTATTGCATTCAA
GTTCAGACCAGGATGGCGCCATTAGAGGGATGCTCACTGTGGCTCGTCAGCTTATCGATCAAGGCAGGCCTTCTCAAGCTCTTCAAGCGGTGGTG
ACGGCCATGAGAACCAGAGGTGGTGAGCAGGCCGTAATTCAAGCCCTTAATCGTGCCCAGGAGCTGTACAGAAATAAAGTACAGGCAAGTGTGGC
TGCAGATGAGCTGGCTTCTTTGTTTGCTGAGTGTGCCATTGCTGAGGCCATCCCTACTATATCCCAACCTTCTGAACATAATACAGTGGATAAAC
CAATTGAAGTAGACGCTGATGGAACTTCAATACTATCTGAAACTGGCAGGAAACAGATAATGTTTGATGCATTCTCTGACGGAAGCAGCTTTGTT
TGCCCTACATGTGGTGGTCTGGTTAGCACCCATCGCAAAGATGAACACTACTCATTCTGGTGTTGCAAAAATTGAGTTAGCTTTCAACTTTGATG
TATTTTAGCCAGTGGGTTTCTCTAGTATTTGCTCTTGG
ATACTAACCCTTGAGTAGAACAAGAGTAAGAAATAGGAAACTCCGGCGACGAAAGTAACAGATCGCAACTGTAACGGAAATGCCATGGACGATGT
AGATGCTGACATGATGGAGGCGGAGTCCACGGTGTCAGTGGAGCCACCGGTACCGCCACTGCCACCGTCACCGTCACCGTCACTATTGCATTCAA
GTTCAGACCAGGATGGCGCCATTAGAGGGATGCTCACTGTGGCTCGTCAGCTTATCGATCAAGGCAGGCCTTCTCAAGCTCTTCAAGCGGTGGTG
ACGGCCATGAGAACCAGAGGTGGTGAGCAGGCCGTAATTCAAGCCCTTAATCGTGCCCAGGAGCTGTACAGAAATAAAGTACAGGCAAGTGTGGC
TGCAGATGAGCTGGCTTCTTTGTTTGCTGAGTGTGCCATTGCTGAGGCCATCCCTACTATATCCCAACCTTCTGAACATAATACAGTGGATAAAC
CAATTGAAGTAGACGCTGATGGAACTTCAATACTATCTGAAACTGGCAGGAAACAGATAATGTTTGATGCATTCTCTGACGGAAGCAGCTTTGTT
TGCCCTACATGTGGTGGTCTGGTTAGCACCCATCGCAAAGATGAACACTACTCATTCTGGTGTTGCAAAAATTGAGTTAGCTTTCAACTTTGATG
TATTTTAGCCAGTGGGTTTCTCTAGTATTTGCTCTTGG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E544193] | SGN-U565482 | Tomato 200607 | Build 2 | 26 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T345068 [Download][View] | Facility Assigned ID: TUS66G10_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.991 | Expected Error Rate: 0.0034 | Quality Trim Threshold: 14.5 |
Working
