EST details — SGN-E543389

Search information 
Request: 543389Match: SGN-E543389
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C192272Clone name: TUS-65-C22
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C94957 [cLEX-6-I7] Trace: SGN-T116052 EST: SGN-E304034 Direction: 5' Facility: TIGR
Clone: SGN-C94957 [cLEX-6-I7] Trace: SGN-T116192 EST: SGN-E304174 Direction: 3' Facility: TIGR
Clone: SGN-C192272 [TUS-65-C22] Trace: SGN-T349745 EST: SGN-E548870 Direction: 3' Facility: INRA (MWG)
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E543389Length: 821 bp (893 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E543389 [] (trimmed) GGCTTTGTACTCACAGAAGCAACTTCAAAATGAGGAGGAGGAGCATAATAAGCGCCTCCGTGGCTTTCGAGAGGTGATCGATTTGATTTCCGCTT
CTCAGAAACCTGTAGTTGCCCACAACTCTCTTAATGATTTTACTTTCGTTCATTCCAAGTTCTTAGCTCCATTGCCATCAACGCTGGAAGAATTC
AGAAGTTCATTATGTTTGGTCTTCCCCAATGTACTTGATGTCAACCATCTTATGAACGAAATCAACCCTCAGACAAAAGTGAACAATTTGCCTGC
ATGTATCTCATATTTGAAACAACGGTTTTTTGCCCCTATTGATATAGAGATACCTAACCAAGCTGAGGTGAATGAAGTGAAGACCCTTGGACATG
ATGCTGTGAAGATAAGCCAATTGTTCGCAAAGCTGTGCTCCATATTGAAAATTGCTCCAAGAACTCCTGAAGCTGCTGAGGGCCATTTTCCTGAT
GCAATTGAATGCTACACAAACTCGTACAACCCTTGCTTTACCAGCTCTCATGGTTCCGCTGATGAAGATGTTAGAGTGAGGACTGATAATACTAG
AAAGATCAGTAGTAAAAATCTAGTTTTCCTATGGGGATTCAGGGGTATGACATCTGCAGGGAAGCTGAAGAGCCTCCTATGTGGTTCACATGACG
TTTTCCATGACTTTGATGTTAGGATGGTGGATAAAAGTTGTGCAGTGGTTGCTTTCAGGAATCCTGGTTTTGCGGAAGTCCTGTTTCAGCTAATG
GACTCTGGAGGAATTTGCACTAATACCCTGAAGGAGATGCTGGCAGATGGCCTGACAGCTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E543389] SGN-U570318 Tomato 200607 Build 2 10 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T344264 [Download][View] Facility Assigned ID: TUS65C22_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.970 Expected Error Rate: 0.0033 Quality Trim Threshold: 14.5