EST details — SGN-E542890
| Search information |
| Request: 542890 | Match: SGN-E542890 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C191981 | Clone name: TUS-64-G19 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C91178 [cLEW-26-E14] | Trace: SGN-T114736 | EST: SGN-E302904 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C191981 [TUS-64-G19] | Trace: SGN-T343764 | EST: SGN-E542889 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E542890 | Length: 826 bp (889 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E542890 [] (trimmed)
GAAGGAAAGTAGTATTAGAAAAGTCTTTGAGAAATCAATGCTCTTCATTTTTTTTTTCCTTTTTCTAAACTAGGGTTTCTATAACAACAACTATT
TGTGTCTTCACTCTATTATAATTTAACTTATAAAGTTTTTTCTAATTTCTTTTTCTCTTCATCTTTCAGATCTAAGAAACCATAAAGTTTTTATT
TTTAGGGGTTATTATCCACTTCAAGATTTAGAATCTTTCTATTTTTGGAAACTTCTCATGAATTGGTGGAAAGAGGATATTTCTGAAGGACGTCT
AATACGTTAAGGGCATTTTTTCGCGAAGAAGAAAATGGTGAGGGGAATAACTGAGATGAAAAGGATTGAAAATACAACAAGTAGACAAGTGACAT
TCTCAAAAAGAAGAGGTGGACTACTTAAGAAGGCATTTGAACTCTCAGTTCTTTGTGATGCTGAAGTTAGTCTCATCATATTTTCTCAAAAAGGA
AAACTTTTTGAGTTTTCAAGTTCAAGTACTAACAAGACAATAGAACGTTATCAAAAGAATGACAAGAATTTGGGTCATGAAAATATATTACTTGA
ACAAACTACAGAGCATTTGAAGGGGGAGGTTATGAGCATGACTAGGAATCTGGAGGTTCTTGAAATCTCTAAAAGAAGGCTTTTAGGAGAAGATT
TAGAGTCTTGTTCCATTGATGAACTTGAAAAGGTTGAAGGACAATTAGACCAAAGTTTAAGAAATATTAGGGCAAAAAAGAACCAGCTATTCAAG
GAACAAATTTCTCTTCTTTAAGACGAAGAAAAAGTCCTAATGAATAAAATGCAGAATTGCGGGAAA
TGTGTCTTCACTCTATTATAATTTAACTTATAAAGTTTTTTCTAATTTCTTTTTCTCTTCATCTTTCAGATCTAAGAAACCATAAAGTTTTTATT
TTTAGGGGTTATTATCCACTTCAAGATTTAGAATCTTTCTATTTTTGGAAACTTCTCATGAATTGGTGGAAAGAGGATATTTCTGAAGGACGTCT
AATACGTTAAGGGCATTTTTTCGCGAAGAAGAAAATGGTGAGGGGAATAACTGAGATGAAAAGGATTGAAAATACAACAAGTAGACAAGTGACAT
TCTCAAAAAGAAGAGGTGGACTACTTAAGAAGGCATTTGAACTCTCAGTTCTTTGTGATGCTGAAGTTAGTCTCATCATATTTTCTCAAAAAGGA
AAACTTTTTGAGTTTTCAAGTTCAAGTACTAACAAGACAATAGAACGTTATCAAAAGAATGACAAGAATTTGGGTCATGAAAATATATTACTTGA
ACAAACTACAGAGCATTTGAAGGGGGAGGTTATGAGCATGACTAGGAATCTGGAGGTTCTTGAAATCTCTAAAAGAAGGCTTTTAGGAGAAGATT
TAGAGTCTTGTTCCATTGATGAACTTGAAAAGGTTGAAGGACAATTAGACCAAAGTTTAAGAAATATTAGGGCAAAAAAGAACCAGCTATTCAAG
GAACAAATTTCTCTTCTTTAAGACGAAGAAAAAGTCCTAATGAATAAAATGCAGAATTGCGGGAAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E542890] | SGN-U572195 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T343765 [Download][View] | Facility Assigned ID: TUS64G19_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.927 | Expected Error Rate: 0.0077 | Quality Trim Threshold: 14.5 |
Working
