EST details — SGN-E542635
| Search information |
| Request: 542635 | Match: SGN-E542635 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C191833 | Clone name: TUS-64-A15 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C90575 [cLEW-23-C9] | Trace: SGN-T114251 | EST: SGN-E301614 | Direction: 5' | Facility: TIGR |
| Sequence |
| Sequence Id: SGN-E542635 | Length: 769 bp (886 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E542635 [] (trimmed)
GGCAAGATGGAATGAAAGTATCAAAAGATATGGACCGTTTAATGGCATATTACAAAGGTCTAACTACTTGGGCTAGATGGGTTGATGGAAATGTT
GACTCCTCTAAGACCAAAGTGTTCTTCCAGGGCATTTCTCCAACTCATTATATGTAAGTGCTACACTTCTTCATTTGCTCAATAATTGCTCGAAT
TTAAGTTTTATATACTGAAAGTTCGAGAACTATTCATATGATCAACTAACTCAAAAGTATGTAACGGTATAACCTATGCTTGCTCGGGCTCTTGA
AAAATGAGCCGGGTCCAAAAGAAACACATAGCTTTTAGAAGATTCAGTACACAACAGTTCTTTTGATGAGTCTGAGCAACATAGTAGGTAACCTA
GAGAAAGTAGCAACCAACGTGCAATCATAGTGCGCGTATAACTAACCACTAACTTTCACTGAATATATATGTTTTCCACGCGTAAGAAGCTCAAA
ATTCATGTTCTGTTGTATCTTGATCAGGGGTCAGGAATGGGGGGCAGCAACAAAGAATTGCAACTCAGAGCAAATACCATTAGCAGGATCGACAT
ATCCAGCAGGGACACCAGCATCAGCAATTGTGGTTAACAAAGTACTAAATAGGATGAAGACACCAGTTCATCTCCTCGATATCACGTTTCTGTCT
CAGTTAAGGAAAGATGCTCATCCATCAATGTACAGCGGCGGTCACCCTGGTGTAGATTGCAGCCACTGGTGTCTCCCTGGACTACCTGATACATG
GAACCAGCT
GACTCCTCTAAGACCAAAGTGTTCTTCCAGGGCATTTCTCCAACTCATTATATGTAAGTGCTACACTTCTTCATTTGCTCAATAATTGCTCGAAT
TTAAGTTTTATATACTGAAAGTTCGAGAACTATTCATATGATCAACTAACTCAAAAGTATGTAACGGTATAACCTATGCTTGCTCGGGCTCTTGA
AAAATGAGCCGGGTCCAAAAGAAACACATAGCTTTTAGAAGATTCAGTACACAACAGTTCTTTTGATGAGTCTGAGCAACATAGTAGGTAACCTA
GAGAAAGTAGCAACCAACGTGCAATCATAGTGCGCGTATAACTAACCACTAACTTTCACTGAATATATATGTTTTCCACGCGTAAGAAGCTCAAA
ATTCATGTTCTGTTGTATCTTGATCAGGGGTCAGGAATGGGGGGCAGCAACAAAGAATTGCAACTCAGAGCAAATACCATTAGCAGGATCGACAT
ATCCAGCAGGGACACCAGCATCAGCAATTGTGGTTAACAAAGTACTAAATAGGATGAAGACACCAGTTCATCTCCTCGATATCACGTTTCTGTCT
CAGTTAAGGAAAGATGCTCATCCATCAATGTACAGCGGCGGTCACCCTGGTGTAGATTGCAGCCACTGGTGTCTCCCTGGACTACCTGATACATG
GAACCAGCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E542635] | SGN-U571213 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T343510 [Download][View] | Facility Assigned ID: TUS64A15_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.979 | Expected Error Rate: 0.0016 | Quality Trim Threshold: 14.5 |
Working
