EST details — SGN-E541866

Search information 
Request: 541866Match: SGN-E541866
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C191389Clone name: TUS-62-O3
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C91635 [cLEW-7-N3] Trace: SGN-T112275 EST: SGN-E297048 Direction: 5' Facility: TIGR
Clone: SGN-C191389 [TUS-62-O3] Trace: SGN-T349495 EST: SGN-E548620 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E541866Length: 752 bp (866 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E541866 [] (trimmed) CTAAAAAATCATTACTTTCTATACAATTTGATGTGCTTGAGTTTCAACAACTTTGTAGGCAACTTTCATTTACTTTGCCATATTGATTCAATGTA
CTTTACAAGAAATTCATACAATTTTGCAAACAAAAAACAAAGTATGTTTTTTTCTAACATGAGAGTGTTTACATTCTTTTTTTCTTGTTCTCTCA
TTAGTGTTGTTTTTTGCTACAAATATGCATAAAGCATTCTATTCCAAGTATCTGGAACTCCAGGCAAACACCAATGTATACAATCTGCAAAATGT
GAAGGCTCTGCTTTCTGTTTATCAGTCAACAATTTGCCTCCTAATTCACCGTAAACCGAAGCATGTCCATCAATTCTGTACTCAGATAATTGTGT
TATGTTAAGAACAGTAACAGCAACTTTCATCCTTCCTATTACATCAACTACTGCCTTCATTAAATCTTTGTTTGAACCAACTCCCCAGTGTCCCT
TCTTCATCACAGGTCTTGTCTCATTGAAACACCTCGTACCGTTCATATTCCCCCAATCTTCATTTCTTTGGTGCGTAGGTGACATAGTGGTAAAG
AACACCTTTGTTTTATTAGTATCGATGGTTGAATCAATCCAATTTGCCCATGTCCTCAATGCTAGCTTGTAAGGAATAGGAGTATCGAATTCTTC
ATATCCCTCTTCGCCATTTGCAAACTCTCCCCATCTGCATTTTTTTTTTTCGAGAAGTCATTTGAAAAAATGCAAGTAGAAGTTCTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E541866] SGN-U601364 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T342741 [Download][View] Facility Assigned ID: TUS62O03_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.937 Expected Error Rate: 0.0031 Quality Trim Threshold: 20.5