EST details — SGN-E541836
| Search information |
| Request: 541836 | Match: SGN-E541836 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C191370 | Clone name: TUS-62-N8 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C91529 [cLEW-2-I10] | Trace: SGN-T112200 | EST: SGN-E297115 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C191370 [TUS-62-N8] | Trace: SGN-T342708 | EST: SGN-E541833 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E541836 | Length: 646 bp (866 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E541836 [] (trimmed)
GAATCAACGCAACTTCTAGAAAAACCCATCAATTTATCTCCATCTTTTCACAGATCTTGAACCAAACTTAGTAGCAGCAGCAGCAGCGGAAGTAG
TAGTAGAAGAAGAAGATGTCGTGGCAAACGTATGTTGATGATCATTTGATGTGTGATATTGAAGGTAATCATCTCACTTCTGCTGCTATCATCGG
TCAGGATGGTTCCGTTTGGGCTCAATCTGCTAATTTTCCTCAGGTTTTGCTTCATACCCACTTCTTATCTTGGTTCAATTTTACTTGGGTTTACG
TTTAGTTTGGTCAAAATCCAGAATTTTGAAGTTGATATGTATCACTAGAGGTAAAGATAGTATTTTTAGTTTATGGGTCTTGAATCACTATCTCT
TTTGCTTACTGTGTTTGTGGATAAATAATTATAAATACAGGGATTGAACCAAAAGCGTAGCTTTAAGACCTGCACCTATTACTCCTTCGGTCTGA
ATTTAAGTGTCTTAATTTGATCGAGCACAAAGTTAAAAGAAATAAAGGTTAGACTTTTGAATTTTTGTGGTCTTAAATTAAAGACGCCTAAGAGA
TACTCTTTTTGGATAAACCAAATGAAAGTTAGACATGTAAATTGGGACGTTGGGAGTATTTCTTTTAGATAGTTGC
TAGTAGAAGAAGAAGATGTCGTGGCAAACGTATGTTGATGATCATTTGATGTGTGATATTGAAGGTAATCATCTCACTTCTGCTGCTATCATCGG
TCAGGATGGTTCCGTTTGGGCTCAATCTGCTAATTTTCCTCAGGTTTTGCTTCATACCCACTTCTTATCTTGGTTCAATTTTACTTGGGTTTACG
TTTAGTTTGGTCAAAATCCAGAATTTTGAAGTTGATATGTATCACTAGAGGTAAAGATAGTATTTTTAGTTTATGGGTCTTGAATCACTATCTCT
TTTGCTTACTGTGTTTGTGGATAAATAATTATAAATACAGGGATTGAACCAAAAGCGTAGCTTTAAGACCTGCACCTATTACTCCTTCGGTCTGA
ATTTAAGTGTCTTAATTTGATCGAGCACAAAGTTAAAAGAAATAAAGGTTAGACTTTTGAATTTTTGTGGTCTTAAATTAAAGACGCCTAAGAGA
TACTCTTTTTGGATAAACCAAATGAAAGTTAGACATGTAAATTGGGACGTTGGGAGTATTTCTTTTAGATAGTTGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E541836] | SGN-U590929 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T342711 [Download][View] | Facility Assigned ID: TUS62N08_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.963 | Expected Error Rate: 0.0066 | Quality Trim Threshold: 14.5 |
Working
