EST details — SGN-E540201

Search information 
Request: 540201Match: SGN-E540201
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C190418Clone name: TUS-60-F16
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C75110 [cLES-12-O17] Trace: SGN-T99993 EST: SGN-E286462 Direction: 5' Facility: TIGR
Clone: SGN-C190418 [TUS-60-F16] Trace: SGN-T341073 EST: SGN-E540198 Direction: 3' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E540201Length: 377 bp (901 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E540201 [] (trimmed) TGAAATTAAGGCTTTGGCATAATGAGGAACTAGACGAAGATGTTGCTGACGTGCCGCATTTACTTCCACCGTGTATCTATTCTACTGCTATCTGA
ACATCTCATCAGCTGAGTATTGGTGTTTAAGGCTCCATTTTAATTCGGAGCTTGGAGAACTACGTTTTGAATATTTGATTGGTGTAATTGAGAAA
AGAAGTTGAATGTTCAAAGATTGTGAAAAAGAAGTTGTGAAACACTTTAGCTTTTTGCCTTTTGGTTTGTTTTATGGAAACAAAAACAATGTGTA
TATGGTTTTAGGAGCAACTGTTGTGGTATTTATATATGTGGAATACGAACCAATTGTTGTCTGAATAGCAACATTCATTAATTTGCTGGACT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E540201] SGN-U579973 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T341076 [Download][View] Facility Assigned ID: TUS60F16_Q1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.927 Expected Error Rate: 0.0000 Quality Trim Threshold: 12.5