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EST details — SGN-E539630

Search information 
Request: 539630Match: SGN-E539630
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C190087Clone name: TUS-59-H21
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C72665 [cLER-20-N21] Trace: SGN-T96788 EST: SGN-E285216 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E539630Length: 228 bp (902 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E539630 [] (trimmed) CGCATTACCACCTCAATTTATTCTCCTTCCCGACTCCCCAAATTATTACAGCTCTTATGGCTCTGAAATGTACCACACTGAATAACAAGTTTACT
AAACAACGTAACATAGTCGGATTCTGAACAAAAAATAAAGCTTACTTCAGAACCCTTGCTTACCAGAGAGACCGATCGGACTGTACTGTTCTAAC
TCTCTGGTGCATACGACATTTGCCCCGGAGGTATGATC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E539630] SGN-U589928 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T340505 [Download][View] Facility Assigned ID: TUS59H21_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read -- flanking 5' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.989 Expected Error Rate: 0.0437 Quality Trim Threshold: 12.5