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EST details — SGN-E539616

Search information 
Request: 539616Match: SGN-E539616
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C190079Clone name: TUS-59-H13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C72590 [cLER-20-J8] Trace: SGN-T96982 EST: SGN-E285410 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E539616Length: 201 bp (892 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E539616 [] (trimmed) GCCAGTCTGAACTTTCTTCTAGCCGTTTTTACTTCTTGTTCATGTTGATTATCCACAAGATGACCTTGATCATGTGGCTTATTTGGATCTGCACA
ATGAAATCTGTTGGCTATATTAGTCTGGCATTGACCTCTTCGTTGGTGTCATTTGTAACAGTCCTCAGACCGTTTCCATTCTTCTAAAAAACCTG
CCCCTAACATA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E539616] SGN-U587342 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T340491 [Download][View] Facility Assigned ID: TUS59H13_P1
Submitter: Koni Sequencing Facility: INRA (MWG)
Funding Organization: INRA
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.950 Expected Error Rate: 0.0296 Quality Trim Threshold: 14.5