EST details — SGN-E539205
| Search information |
| Request: 539205 | Match: SGN-E539205 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C189840 | Clone name: TUS-58-N14 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C69576 [cLER-11-L16] | Trace: SGN-T94208 | EST: SGN-E279456 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C189840 [TUS-58-N14] | Trace: SGN-T340083 | EST: SGN-E539208 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E539205 | Length: 570 bp (895 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E539205 [] (trimmed)
GGAAACGATGGATTGCACATTGCTAAAAGGAAATATAATCAAATGACAGATTTTGGTAGCTGATCGACAACACAATTTTACCTAAAAAGATGGAA
TGTTGCTTTACAAGTTGCTTACTGGATTCCGTAGGAACTTCCCGGCACGGGATTTGAAAGGGTTACAACAGACAGATAAGTATGCTTATTGAACA
GTCAATTTCAGCAGCCAGGAAAGGGAATTGGAGTTGTCCAAAAACAACAATTTTGTGAAGAATTCTTTGCTTAATCTTCACTTACTGGAACTTGA
AACGAAAATCAATCAAAATGCGAAGAAAAGATGAGCATAACTTCCGAAAAAACTGGCTTCTGGGCGGCTCCCTACTCTCACATGGCCTGTGCATT
TCATCCTTTCCTCTATAGGAAACCCTCAATCCCTTTTCCTGCCTGCACTTCCCTATATATTGTAAGGGCTTCATCCATTACTTTAGCCTGAGCCA
ACAACTGCGCTCTCTTCTTCCCAGAAGGATGAGTAGACAGATAATCTCTCAAGGCTGATTCCCCGGAAATTTTGCCCAGCTTCTCATAGACTGAG
TGTTGCTTTACAAGTTGCTTACTGGATTCCGTAGGAACTTCCCGGCACGGGATTTGAAAGGGTTACAACAGACAGATAAGTATGCTTATTGAACA
GTCAATTTCAGCAGCCAGGAAAGGGAATTGGAGTTGTCCAAAAACAACAATTTTGTGAAGAATTCTTTGCTTAATCTTCACTTACTGGAACTTGA
AACGAAAATCAATCAAAATGCGAAGAAAAGATGAGCATAACTTCCGAAAAAACTGGCTTCTGGGCGGCTCCCTACTCTCACATGGCCTGTGCATT
TCATCCTTTCCTCTATAGGAAACCCTCAATCCCTTTTCCTGCCTGCACTTCCCTATATATTGTAAGGGCTTCATCCATTACTTTAGCCTGAGCCA
ACAACTGCGCTCTCTTCTTCCCAGAAGGATGAGTAGACAGATAATCTCTCAAGGCTGATTCCCCGGAAATTTTGCCCAGCTTCTCATAGACTGAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E539205] | SGN-U571558 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T340080 [Download][View] | Facility Assigned ID: TUS58N14_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.966 | Expected Error Rate: 0.0002 | Quality Trim Threshold: 12.5 |
Working
