EST details — SGN-E539095
| Search information |
| Request: 539095 | Match: SGN-E539095 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C189776 | Clone name: TUS-58-K22 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C74009 [cLER-7-G7] | Trace: SGN-T93412 | EST: SGN-E280949 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C189776 [TUS-58-K22] | Trace: SGN-T339973 | EST: SGN-E539098 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E539095 | Length: 504 bp (894 bp untrimmed) |
| Status: Current Version | Direction: 3' [See links to 5' reads above] |
>SGN-E539095 [] (trimmed)
AGAAGTTTTAACTCACAGGTAGATTTAAATATAACTTTACACAACATATGAACAAATAGCAATATACAAATAATAATAAAGCCTCAAGCAACTAT
ACTGGCAAAACCTTATGATGGGACATGAATGTCTAAATAAATGAGAAGGAATAACTTGCATCAAGCCAGCAAGCAGAGCTGTCCTAGTAAAGAAA
AAAATCTATAATTTTCATCGAAAATATTTTATTTCTCCAAGATATATTTGTGGATAATCCAATGTGCACAAAGCAGTGAATTGTGGATGTTCCAT
ATTCGCGGCAAAGCAATCAAATATATTTTAAGGTCGGATCATACTTTTCCTTGATGGATTGCTCCTTAATGCTTGACCTGCACTGGAAATGTGTG
AAGTTTGGATGAAGGTGAGATCTTTGAAGCTGTTTTACTTCCTGCTGGCCCTTTCTTGGAAGCTGCTGGGGACGAACCCTTAGCTGCACTTCTTT
CTGCAATCCTCTTTTGCCTCTCGATCACT
ACTGGCAAAACCTTATGATGGGACATGAATGTCTAAATAAATGAGAAGGAATAACTTGCATCAAGCCAGCAAGCAGAGCTGTCCTAGTAAAGAAA
AAAATCTATAATTTTCATCGAAAATATTTTATTTCTCCAAGATATATTTGTGGATAATCCAATGTGCACAAAGCAGTGAATTGTGGATGTTCCAT
ATTCGCGGCAAAGCAATCAAATATATTTTAAGGTCGGATCATACTTTTCCTTGATGGATTGCTCCTTAATGCTTGACCTGCACTGGAAATGTGTG
AAGTTTGGATGAAGGTGAGATCTTTGAAGCTGTTTTACTTCCTGCTGGCCCTTTCTTGGAAGCTGCTGGGGACGAACCCTTAGCTGCACTTCTTT
CTGCAATCCTCTTTTGCCTCTCGATCACT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E539095] | SGN-U571158 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T339970 [Download][View] | Facility Assigned ID: TUS58K22_P1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.950 | Expected Error Rate: 0.0003 | Quality Trim Threshold: 12.5 |
Working
