EST details — SGN-E537755
| Search information |
| Request: 537755 | Match: SGN-E537755 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C188946 | Clone name: TUS-56-I8 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C49254 [cLEI-7-J9] | Trace: SGN-T81053 | EST: SGN-E266828 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C188946 [TUS-56-I8] | Trace: SGN-T338627 | EST: SGN-E537752 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E537755 | Length: 781 bp (858 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E537755 [] (trimmed)
GAAGAGTTGGGGATGATTTTTGGTTCCAAGATCCAAATGGCGATCCGAATGGAGTGTACTGGCTACAAGGTGTTCATATGATTCATTGTGCCTAC
AACAGTATGTGGATGGGTCAGATTATTCAACCAGACTGGGACATGTTCCAATCTGATCATGTCTGTGCTAAGTTCCATGCTGGCTCCAGGGCAAT
CTGTGGAGGACCTGTTTATGTTAGTGACTCCTTGGGTGGTCACGATTTCGATCTTTTAACGAAGTTAGTTTACCCTGATGGCACCATTCCCAAGT
GCCAATATTTTGCACACCCCACTAGAGACTGCATCTTCAAGAATCCACTCTTTGATGGCAAAACCATACTCAAGATTTGGAATTTCAACAAGTAT
GGAGGAGTCATTGGTGCATTCAATTGCCAAGGAGCAGGTTGGGATCCAAAGGAGAAAAGAATCAAGGGATACTCAAATTGCTACAAGCCAATGAA
AGGATCAGTTCATGTCAATGACATCGAATGGGACCAACTCATCGCAGCATCTGAAATGGGCAACGCGGAGGAATATGTTGTGTATCTCAACCAAG
CTGAGGAATTGTTCTTAACAAAGTCTACATCAGATACAATTCCAATAACTCTTGAACCATCTACTTTCGAGATCTTTAGCTTTGTACCGATAAAA
CAGCTCAACCACATTGCTAAATTTGGTCCAATTGGACTCACCAACATGTTCAATAGTGGAGGAGCCATACAAGGAGTTCAATATGGTGATGGTGC
TAATTATGTAAGTGCAAAAAG
AACAGTATGTGGATGGGTCAGATTATTCAACCAGACTGGGACATGTTCCAATCTGATCATGTCTGTGCTAAGTTCCATGCTGGCTCCAGGGCAAT
CTGTGGAGGACCTGTTTATGTTAGTGACTCCTTGGGTGGTCACGATTTCGATCTTTTAACGAAGTTAGTTTACCCTGATGGCACCATTCCCAAGT
GCCAATATTTTGCACACCCCACTAGAGACTGCATCTTCAAGAATCCACTCTTTGATGGCAAAACCATACTCAAGATTTGGAATTTCAACAAGTAT
GGAGGAGTCATTGGTGCATTCAATTGCCAAGGAGCAGGTTGGGATCCAAAGGAGAAAAGAATCAAGGGATACTCAAATTGCTACAAGCCAATGAA
AGGATCAGTTCATGTCAATGACATCGAATGGGACCAACTCATCGCAGCATCTGAAATGGGCAACGCGGAGGAATATGTTGTGTATCTCAACCAAG
CTGAGGAATTGTTCTTAACAAAGTCTACATCAGATACAATTCCAATAACTCTTGAACCATCTACTTTCGAGATCTTTAGCTTTGTACCGATAAAA
CAGCTCAACCACATTGCTAAATTTGGTCCAATTGGACTCACCAACATGTTCAATAGTGGAGGAGCCATACAAGGAGTTCAATATGGTGATGGTGC
TAATTATGTAAGTGCAAAAAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E537755] | SGN-U565843 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T338630 [Download][View] | Facility Assigned ID: TUS56I08_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.971 | Expected Error Rate: 0.0012 | Quality Trim Threshold: 14.5 |
Working
