EST details — SGN-E537655
| Search information |
| Request: 537655 | Match: SGN-E537655 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C188888 | Clone name: TUS-56-F22 |
| ||
| Library Name: TUS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C48787 [cLEI-5-N22] | Trace: SGN-T80696 | EST: SGN-E266724 | Direction: 5' | Facility: TIGR |
| Clone: SGN-C188888 [TUS-56-F22] | Trace: SGN-T348802 | EST: SGN-E547927 | Direction: 3' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E537655 | Length: 556 bp (1032 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E537655 [] (trimmed)
GTCTGCGATATTTACAAATTTATTCCTTTATCGAATCCAAAAAATAAAAATGAAGCAAGCAATACATAAGAAATTAAAAGTAGTTCAATTTCCAT
TCAAAGAAAATAAAAAAGTACATCAATCAAACACATAACCCCTCATTATTTCATATCAATTACATGACACACCATGTGATAAAAAAAAATAAATG
CACACTCATGAGGATCAATTATTTTATCACAAACTCAAATTAATTAAGGATAAACCTCAATTAGTGACCTTAATCCAAGAATTGGAGTAACTTTA
TAGTCACTAAATCCAGCCTCAGAAAAGATTTTAGCCCATCCTCTTTCAGATCTCTCTCTTCCAGTAACCAAAACCATCATTAACATATCAAAGAA
AATTTGAGTTTCAATTGATTCATCATCTCCAATTTTATTATCAACCATCATGGCAATAATTATCACCTTTTCCCACCTTTTTCCTTGCTGGGTAT
CGCTTCTTTACATTTCTTTAGTATTTTTCACACTTTCTTCGTCACTCCCATCATGTAATATCCACTTGAGTAGAAGAAGCC
TCAAAGAAAATAAAAAAGTACATCAATCAAACACATAACCCCTCATTATTTCATATCAATTACATGACACACCATGTGATAAAAAAAAATAAATG
CACACTCATGAGGATCAATTATTTTATCACAAACTCAAATTAATTAAGGATAAACCTCAATTAGTGACCTTAATCCAAGAATTGGAGTAACTTTA
TAGTCACTAAATCCAGCCTCAGAAAAGATTTTAGCCCATCCTCTTTCAGATCTCTCTCTTCCAGTAACCAAAACCATCATTAACATATCAAAGAA
AATTTGAGTTTCAATTGATTCATCATCTCCAATTTTATTATCAACCATCATGGCAATAATTATCACCTTTTCCCACCTTTTTCCTTGCTGGGTAT
CGCTTCTTTACATTTCTTTAGTATTTTTCACACTTTCTTCGTCACTCCCATCATGTAATATCCACTTGAGTAGAAGAAGCC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E537655] | SGN-U575022 | Tomato 200607 | Build 2 | 14 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T338530 [Download][View] | Facility Assigned ID: TUS56F22_Q1 |
| Submitter: Koni | Sequencing Facility: INRA (MWG) |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.889 | Expected Error Rate: 0.0073 | Quality Trim Threshold: 14.5 |
Working
