Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

EST details — SGN-E414628

Search information 
Request: 414628Match: SGN-E414628
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C269304Clone name: STM-19-J10
nocartOrdering Not Available
Library Name: STMOrganism: Solanum tuberosum

Tissue: mixed tissues
Development Stage:

There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C269304 [STM-19-J10] Trace: SGN-T266766 EST: SGN-E414629 Direction: 3' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E414628Length: 488 bp (917 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E414628 [] (trimmed) GACCTAGTCTCGAGTTTTTTTTTTTTTTTCCGTTCATCATTATCTTCTCTATCATTCTCGCAGCCTCTGTTTTTTTTCTTCATGTCGGTTTATCT
GTATCCTCTTAGTTTCAGTTTTTATTAAGCTGAACTTCAATTTATTGAGTTTTTTTTCACTGTGTGTATTGAAGTTGAGCTTGTTAGTTGAGGTG
GAGGAAGTTTTTTTGATTTTTTTCTGCTAATTTGGGGATACAAAGTGTTTATTCAGCTGGTTTTTGCTGTTTTGTTATCTGGGTCGTGCTTAAGT
TTTGGTGAAAATACTTGTTTGTGAGTTGTGATCGTTGAGCAGTGGTTGATCAAGGTGTTTTTTTCTTCATTTTCCTTGAGTTATACCTGAGGTAG
AATAAGTTTCTGTGGGTCTTTTTCTGCTAATTGGAGGATAAACCTTCTTTATTCAGCTGTTCTTCTCCATTTTATATTCTGGGTTGAGCTTATTT
TCTGCTAAAAAAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E414628] SGN-U277778 Solanum tuberosum Build 4 3 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T266765 [Download][View] Facility Assigned ID: STMCX53TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.884 Expected Error Rate: 0.0203 Quality Trim Threshold: 14.5