EST details — SGN-E399423

Search information 
Request: 399423Match: SGN-E399423
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183697Clone name: TUS-42-N15
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183697 is on microarray TOM1 spot ID 1-1-2.2.1.5 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C32439 [cLEG-1-I3] Trace: SGN-T64433 EST: SGN-E248370 Direction: 5' Facility: TIGR
Clone: SGN-C183697 [TUS-42-N15] Trace: SGN-T195083 EST: SGN-E393757 Direction: 5' Facility: INRA
Clone: SGN-C183697 [TUS-42-N15] Trace: SGN-T195084 EST: SGN-E393758 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E399423Length: 570 bp (910 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E399423 [] (trimmed) TTGAACTTGACAAACCCAACTTTGAGCCTATCGCAGCCATTGGCATTGAGATCTGGACAATGCAAGATGGCATATTGTTTGACAATATCTTGATT
GCTAGTGATGAAGAAGTTGCAGAATCATACAGGAAGACTGCCTGGAAACCCAAGTTTGATGTAGAAAAGGAGAAACAGAAAGCTGAGGAAGAAGC
AGAATCTGGTGGCCTCAAAGGATACCAGAAATTAGTATTTGACCTCCTCTACAAGGTAGCTGGTATCCCATTCTTGGGTGAACACAAGACCAAAG
TATTGGATCTTCTCGAGAAAGCTGAGAAACAGCCCAATATCACAGTTGGTGTCGTTGTCTCAATTGTAGTGGTTGTCTTCTCAGTTCTATTGAAG
CTCATTTTCGGTGGGAAGAAGCAGCAACCTGCTAGAGCTAGTGCCGAGACTGAGAAAACTGACGGAGCTGAAACCTCGACTTCCAATAGTCAAGC
CGCTGAGGAGAAGGAAGAGCAAAGTGAGGATGCTGGTGCTGCTCCTCGTCGAAGGACTAGGCGCCACAATTATGATGGGGAAACGGTCTAGTGGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E399423] SGN-U585307 Tomato 200607 Build 2 52 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T195083 [Download][View] Facility Assigned ID: FA0AAD30CG08RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.975 Expected Error Rate: 0.0017 Quality Trim Threshold: 14.5