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EST details — SGN-E399366

Search information 
Request: 399366Match: SGN-E399366
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183507Clone name: TUS-42-F17
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183507 is on microarray TOM1 spot ID 1-1-8.2.1.7 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C34210 [cLEG-30-C15] Trace: SGN-T69165 EST: SGN-E255439 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E399366Length: 602 bp (913 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E399366 [] (trimmed) TGCAGCTACCTCTCTATACGTCTCCGAGATGCTCGGAAGTCCGGTCAAGTTTAGCGGTGTTGCAAGGCCTGCTGCTCCATCTCCATCCTCCTCTG
CTACCTTCAAAACTGTTGCCCTTTTCAAAAAGAAGGCGGCTGCAGCTCCTGCCAAAGCTAAGGCTGCCGCTGTCTCCCCTGCTGACGATGAGCTC
GCCAAGTGGTACGGACCTGACAGAAGAATTTTCCTGCCCGAGGGTCTATTGGACAGATCAGAAATCCCCGAGTACTTGAACGGAGAAGTTCCCGG
AGACTACGGTTACGATCCTTTTGGTTTGAGCAAGAAGCCAGAAGACTTCGCCAAATATCAGGCATATGAGCTGATCCACGCCAGATGGGCTATGC
TCGGTGCTGCTGGGTTTATTATCCCAGAAGCCTTCAACAAATTTGGTGCCAACTGTGGTCCTGAAGCTGTTTGGTTCAAGACTGGAGCTTTACTT
CTAGACGGAAACACATTGAATTACTTCGGAAAGAACATTCCCATCAACCTTATTCTTGCTGTCGTCGCAGAGGTTGTTCTTGTTGGTGGTGCTGA
GTACTACAGAATTATTAATGGCTTGGCATTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E399366] SGN-U580870 Tomato 200607 Build 2 302 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T200354 [Download][View] Facility Assigned ID: FA0AAD30CC09RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.986 Expected Error Rate: 0.0012 Quality Trim Threshold: 14.5