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EST details — SGN-E399251

Search information 
Request: 399251Match: SGN-E399251
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183486Clone name: TUS-42-E20
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183486 is on microarray TOM1 spot ID 1-1-5.1.1.7 [Order] [Tomato Microarray Database]
See unigene SGN-U577360 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C183486 [TUS-42-E20] Trace: SGN-T195025 EST: SGN-E393699 Direction: 3' Facility: INRA
Clone: SGN-C183486 [TUS-42-E20] Trace: SGN-T195026 EST: SGN-E393700 Direction: 5' Facility: INRA
Clone: SGN-C183486 [TUS-42-E20] Trace: SGN-T195027 EST: SGN-E393701 Direction: 5' Facility: INRA
Clone: SGN-C183486 [TUS-42-E20] Trace: SGN-T200291 EST: SGN-E399250 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E399251Length: 626 bp (898 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E399251 [] (trimmed) GCTTTTCTTCCCTATCTTCTCATTTCTCCTTTTTCTCTCTTCTCTCTGTTACACAGAGAATTCAGTTATGGCCGGAAGTGGTGTCGTTACAGTTT
ACGGAAATGGTGCTCTCACAGAGACAACCAAGCAATCCCCCTTCTCTGTGAAAGTGGGTCTCGCTCAGATGCTTCGGGGAGGCGTTATCATGGAC
GTTGTTAATGCTGAACAGGCTCGTATAGCCGAGGAGGCCGGTGCGTGTGCTGTCATGGCTCTTGAGCGTGTCCCTGCTGATATACGCGCTCAGGG
CGGCGTTGCACGTATGTCGGATCCCCAGCTTATCAAAGAAATCAAACAGGCTGTGACAATTCCTGTTATGGCCAAGGCTCGTATTGGTCATTTCG
TGGAGGCTCAAATCCTTGAGGCTATTGGAATCGATTACGTTGATGAATCGGAGGTGCTTACCCTTGCTGACGATGAGAACCACATCAACAAGCAC
AATTTCCGTATCCCCTTTGTCTGTGGCTGCCGTAATTTGGGTGAGGCTCTTCGCCGTATCCGTGAGGGTGCTGCCATGATTCGGACCAAGGGGGA
AGCTGGTACCGGAAACATTATCGAGGCTGTTCCTCATGTGCTTTCCGTTATGGGTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E399251] SGN-U577360 Tomato 200607 Build 2 70 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T195026 [Download][View] Facility Assigned ID: FA0AAD30BC10RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.987 Expected Error Rate: 0.0032 Quality Trim Threshold: 14.5