EST details — SGN-E399152

Search information 
Request: 399152Match: SGN-E399152
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183525Clone name: TUS-42-G11
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183525 is on microarray TOM1 spot ID 1-1-6.3.1.3 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C77519 [cLES-2-E20] Trace: SGN-T97132 EST: SGN-E281972 Direction: 5' Facility: TIGR
Clone: SGN-C183525 [TUS-42-G11] Trace: SGN-T196120 EST: SGN-E394794 Direction: 3' Facility: INRA
Clone: SGN-C183525 [TUS-42-G11] Trace: SGN-T200242 EST: SGN-E399153 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E399152Length: 358 bp (967 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E399152 [] (trimmed) GATAAATATCGTCATATATATATATATATATAATACATGATGTAGTTTTTACCCAAGTTACCACATATTGAAGTAGTAGTATGTACAAAATTAGG
AAATTGCTCTGTTTTCATATATTGTTATTAGTCTCAAACAATCACACAACTATGTTTGTTTGTGTTGTTACCATCATAACATTTTGCATAGCTAG
AGCATTACTAGTACCCATCGGAATATGGCCGTTATCGTTACTGTTTTTCTCCGTCTTCTTTAATTCTTTCAGTTCTCTCGCCCTCGCTCTCCAAT
TCCAGAAAGTTCCAAACAATGTTTCCATTTCTTCCAAAGTCTTCCCTTGAGATTCCGGCATCAAAGTGTATAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E399152] SGN-U565600 Tomato 200607 Build 2 65 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T200241 [Download][View] Facility Assigned ID: FA0AAD30AD06FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.912 Expected Error Rate: 0.0059 Quality Trim Threshold: 14.5