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EST details — SGN-E398743

Search information 
Request: 398743Match: SGN-E398743
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184810Clone name: TUS-45-L24
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184810 is on microarray TOM1 spot ID 1-1-1.4.14.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C184810 [TUS-45-L24] Trace: SGN-T198851 EST: SGN-E397525 Direction: 3' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E398743Length: 655 bp (828 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E398743 [] (trimmed) CAGAACAAACGTTGCATGGAATCCGCGGGGGCAATGGAGTTCTTAGCTTCTATTATTAATAAAAATTCGAGTGAAGTGTTTGAAGAAGAAGAGGG
TATCATGAGTATTAAAGACGAAGCACTTATCATCCTCTATCAACTCAAATTATCTGAAAATGGATTGAGGTCACTCATCTTGAGTGGAAATGGAG
AATTTATCGAGTCATTGACACGTGTCATGCAACATGGAAGCTATGAATTTAGGGCTTACACGGTTATGTTAATGAAAGACATGTTCGAGGTATCC
ACACCAACTCTACTTTTGAGTTTGAAGAAAGAATTCTTCACACAAGTTGTTCAAGTCTTGAGGGATGAGATCTCTCAAAAGGCTATGAAAGCATC
ATTGCAAGTGCTAGTGCATGCGTGTCCATTTGGGAGGAATAGAGTGAAAGTAGCAGAAGCAGGAGCAATTAGGGTTTTGATTGATCTTCTGCTTG
ATTCATCTGAGAAGAGGGTTTGTGAATTGATGTTAATTTTGTTAGATCAAATTTGTCAGATCGCAGAACGGAGAGCTGAGCTATTGAATCACCCC
GGAGGGTTAGCTATTGTGTCCCAGAGAATACTTAGGGTTTCGAAAGTTGGGAGTGAAAGGGCAATCCAGATCTTGCATTCAATCT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E398743] SGN-U582344 Tomato 200607 Build 2 22 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T200069 [Download][View] Facility Assigned ID: FA0AAD33DF12RM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.967 Expected Error Rate: 0.0122 Quality Trim Threshold: 14.5