EST details — SGN-E398706

Search information 
Request: 398706Match: SGN-E398706
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184732Clone name: TUS-45-I18
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184732 is on microarray TOM1 spot ID 1-1-7.1.14.17 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C84120 [cLET-27-I24] Trace: SGN-T109206 EST: SGN-E295999 Direction: 5' Facility: TIGR
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Sequence 
Sequence Id: SGN-E398706Length: 170 bp (941 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E398706 [] (trimmed) CTGAATTATAAATGTTTTCTACAGAACAATTAGTTACATTTTTATGGCATGGTATTCAACTTACAGCTCTCATCTTCAAGTTTTTGACTGTTGAG
TTTGAGCAACAACAAACATTACTCAATATATCTCCTAAATTTACTTAATAAAAAGAACAAGTAGATTGGTTTCTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E398706] SGN-U572285 Tomato 200607 Build 2 16 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T200032 [Download][View] Facility Assigned ID: FA0AAD33BE09FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.862 Expected Error Rate: 0.0163 Quality Trim Threshold: 14.5