EST details — SGN-E398368

Search information 
Request: 398368Match: SGN-E398368
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C184007Clone name: TUS-43-K13
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C184007 is on microarray TOM1 spot ID 1-1-4.3.18.1 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C14897 [cLEC-9-I16] Trace: SGN-T25069 EST: SGN-E200775 Direction: 5' Facility: TIGR
Clone: SGN-C184007 [TUS-43-K13] Trace: SGN-T196268 EST: SGN-E394942 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E398368Length: 722 bp (873 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E398368 [] (trimmed) GAACTGAAATATCTTTTAACACTTTTAAAGTTGATCAAAACAAACTTCCAATGCAGATAAGAACTCTACTAGAATAACAGTAACAGGTAATACTA
ACTAATGACGATTCTCTTCCATAAGACATTCGCTAAGGGAAAACAAAAAAAAACTCGAGACTAGTTCTCTTTTTTTTTATCACAAATAATATGTA
ACCATTCCTTATTTCATTACTCACAAAAAAAATTGGAAATTTCTCTATTTTGAATAATAGGAGAAAAATACATAAATAATTTATATTATGAATGA
ATAAATTAATTAGCTAAATATAATTACACTCAATATATATTAATTAATGGACCAAGTAGGTAATTGCAAGGGCAACAAGTAGAAGAACATAAGCA
ATCCCTTGATCAATTGTTGTGCCTGCAAAACAAATTTATTAAATCAATATAATTTCTTCATTAAAGTATATTTATGAGGAAAAAAAAATAGAAAA
GAAATACTGTTTAGAAAAATTATATTATCAGTATACTTTAACTTATTGTATCATATATAACTTGTATTAGTCACGTTATTGCAGATAGTCTATCT
TAATTTCAAAAATAAAAAAACTTCACTTTTTACAGAAATGCGCGTATGAGTTAATTTCATAATTTTTTATACTATCATGTATATAAGTTAAACTC
AGAATTACGTATATAGTTAATTAATGTAGTAATTTGAGTAAATTTTAAAAAAATGTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E398368] SGN-U577741 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T199694 [Download][View] Facility Assigned ID: FA0AAD31AF07FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 3' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.887 Expected Error Rate: 0.0062 Quality Trim Threshold: 14.5