EST details — SGN-E398294

Search information 
Request: 398294Match: SGN-E398294
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C183015Clone name: TUS-41-B5
cartOrder Clone
Library Name: TUSOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Rearrayed collection of L. esculentum cDNA clones
Development Stage:

Microarray: SGN-C183015 is on microarray TOM1 spot ID 1-1-4.2.3.4 [Order] [Tomato Microarray Database]
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C67176 [cLEN-17-L18] Trace: SGN-T90901 EST: SGN-E276480 Direction: 5' Facility: TIGR
Clone: SGN-C183015 [TUS-41-B5] Trace: SGN-T195162 EST: SGN-E393836 Direction: 5' Facility: INRA
Clone: SGN-C183015 [TUS-41-B5] Trace: SGN-T200138 EST: SGN-E398836 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E398294Length: 289 bp (861 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E398294 [] (trimmed) GACCCTTAAAACAACTACCAAGAGTATTTGAAGCTTAAAACAAGAGTGGAAATGTTACAACAGTCTCAAAGGCATTTTCTAGGTGAGGATTTGGG
ACAATTGGGCACAAAAGACTTGGAACAGCTTGAACGTCAATTGGATTCATCATTGAGGCAAATTAGGTCAACAAAGACACAACACATTCTTGATC
AACTTGCTGAACTTCAACAAAAGGAACAATCTCTTACTGAAATGAACAAGTCTTTGAGAATAAAGTTGGAAGAACGTGGTGTTACCTTTCAAACA
TCGG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E398294] SGN-U578471 Tomato 200607 Build 2 24 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T199620 [Download][View] Facility Assigned ID: FA0AAD29CA03FM1
Submitter: Koni Sequencing Facility: INRA
Funding Organization: Funding for 5' and 3' resequencing of TOM1 microarray clones was provided by INRA. Sequencing was performed by Genoscope, Evry cedex, France. \ \ \
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.929 Expected Error Rate: 0.0190 Quality Trim Threshold: 14.5